Evidence map›Paper›PMID 22262812›Full record

ArticleCancer prevention research (Philadelphia, Pa.)2012

Microsatellite instability and DNA mismatch repair protein deficiency in Lynch syndrome colorectal polyps.

Matthew B Yurgelun, Ajay Goel, Jason L Hornick, Ananda Sen, Danielle Kim Turgeon, Mack T Ruffin, Norman E Marcon, John A Baron, Robert S Bresalier, Sapna Syngal and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer prevention research (Philadelphia, Pa.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 107 citations in OpenAlex.

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  19. Mismatch repair deficiency occurs very rarely in seminomas.Translational andrology and urology · 2021
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 2 countries.

Matthew B YurgelunBeth Israel Deaconess Medical Center, Boston, Massachusetts, USA.
Ajay Goel
Jason L Hornick
Ananda Sen
Danielle Kim Turgeon
Mack T Ruffin
Norman E Marcon
John A Baron
Robert S Bresalier
Sapna Syngal
Dean E Brenner
C Richard Boland
Elena M Stoffel
Baylor University Medical Center · USBrigham and Women's Hospital · USAnn Arbor VA Medical Center · USDeaconess Hospital · USMichigan Medicine · USThe University of Texas MD Anderson Cancer Center · USUniversity of North Carolina at Chapel Hill · US

Funding

Great Lakes/New England Clinical Validation CenterU01CA086400 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RICCIARDIELLO, LUIGI, SYNGAL, SAPNA · 2000 to 2025
$26.0M
The Biology and Diagnosis of HNPCCR01CA072851 · NCI · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI GOEL, AJAY · 1996 to 2019
$6.6M
The Genetics and Prevention of Gastrointestinal CancersK24CA113433 · NCI · DANA-FARBER CANCER INSTITUTE · PI SYNGAL, SAPNA · 2005 to 2014
$1.7M
Genetic Testing and Cancer Screening in Hereditary Cancer SyndromesK07CA120448 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI STOFFEL, ELENA MARTINEZ · 2007 to 2011
$753k
NCI NIH HHS CA72851-16NCI NIH HHS CA 86400NCI NIH HHS K07 CA120448NCI NIH HHS K07 CA 120448-05NCI NIH HHS K24 CA113433NCI NIH HHS R01 CA072851NCI NIH HHS U01 CA086400
6 · The paper itself

Abstract

Colorectal cancers associated with Lynch syndrome are characterized by deficient DNA mismatch repair (MMR) function. Our aim was to evaluate the prevalence of microsatellite instability (MSI) and loss of MMR protein expression in Lynch syndrome-associated polyps. Sixty-two colorectal polyps--37 adenomatous polyps, 23 hyperplastic polyps, and 2 sessile serrated polyps (SSP)--from 34 subjects with germline MMR gene mutations were tested for MSI using a single pentaplex PCR for five mononucleotide repeat microsatellite markers, and also for expression of MLH1, MSH2, MSH6, and PMS2 proteins by immunohistochemistry. High-level MSI (MSI-H) was seen in 15 of 37 (41%) adenomatous polyps, one of 23 (4%) hyperplastic polyps, and one of two (50%) SSPs. Loss of MMR protein expression was seen in 18 of 36 (50%) adenomatous polyps, zero of 21 hyperplastic polyps, and zero of two SSPs. Adenomatous polyps 8 mm or larger in size were significantly more likely to show MSI-H [OR, 9.98; 95% confidence interval (CI), 1.52-65.65; P = 0.02] and deficient MMR protein expression (OR, 3.17; 95% CI, 1.20-8.37; P = 0.02) compared with those less than 8 mm in size. All (six of six) adenomatous polyps 10 mm or larger in size showed both MSI-H and loss of MMR protein expression by immunohistochemistry. Our finding that the prevalence of MMR deficiency increases with the size of adenomatous polyps suggests that loss of MMR function is a late event in Lynch syndrome-associated colorectal neoplasia. Although testing large adenomatous polyps may be of value in the diagnostic evaluation of patients with suspected Lynch syndrome, the absence of an MMR-deficient phenotype in an adenoma cannot be considered as a strong evidence against Lynch syndrome, as it is with colorectal carcinomas.

Indexed as

Base Pair MismatchDNA RepairMicrosatellite InstabilityAdenomaAdultAgedColorectal NeoplasmsColorectal Neoplasms, Hereditary NonpolyposisFemaleGerm-Line MutationHumansMaleMicrosatellite RepeatsMiddle AgedPhenotypePolyps

Identifiers

PMID22262812
PMCPMC3461594
OpenAlexW2147274538

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.