Evidence map›Paper›PMID 22262772›Full record

ArticleBlood2012

Microscale functional cytomics for studying hematologic cancers.

Edmond W K Young, Chorom Pak, Brad S Kahl, David T Yang, Natalie S Callander, Shigeki Miyamoto, David J Beebe

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 43 citations in OpenAlex.

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  12. Leveraging a high resolution microfluidic assay reveals insights into pathogenic fungal spore germination.Integrative biology : quantitative biosciences from nano to macro · 2016
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  19. Characterizing asthma from a drop of blood using neutrophil chemotaxis.Proceedings of the National Academy of Sciences of the United States of America · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Edmond W K YoungDepartment of Biomedical Engineering, University of Wisconsin-Madison, 53705, USA.
Chorom Pak
Brad S Kahl
David T Yang
Natalie S Callander
Shigeki Miyamoto
David J Beebe
Wisconsin Institutes for Discovery · USEmory University Hospital · USUniversity of Wisconsin Carbone Cancer Center · USUniversity of Wisconsin–Madison · US

Funding

MECHANISMS OF CONSTITUTIVE NF KB ACTIVITYR01CA081065 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI MIYAMOTO, SHIGEKI · 1999 to 2007
$2.5M
Microchannel cell-based assays to enable cancer researchR33CA137673 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BEEBE, DAVID J · 2009 to 2011
$1.4M
Enabling NF-kB Signal Transduction Studies in Primary Multiple Myeloma CellsR01CA155192 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BEEBE, DAVID J, MIYAMOTO, SHIGEKI · 2012 to 2016
$1.4M
Mechanisms of constitutive NF-kB activityR56CA081065 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI MIYAMOTO, SHIGEKI · 2009 to 2009
$251k
NCI NIH HHS R01 CA081065NCI NIH HHS R01 CA155192NCI NIH HHS R33 CA137673NCI NIH HHS R56 CA081065
6 · The paper itself

Abstract

An important problem in translational cancer research is our limited ability to functionally characterize behaviors of primary patient cancer cells and associated stromal cell types, and relate mechanistic understanding to therapy selection. Functional analyses of primary samples face at least 3 major challenges: limited availability of primary samples for testing, paucity of functional information extracted from samples, and lack of functional methods accessible to many researchers. We developed a microscale cell culture platform that overcomes these limitations, especially for hematologic cancers. A key feature of the platform is the ability to compartmentalize small populations of adherent and nonadherent cells in controlled microenvironments that can better reflect physiological conditions and enable cell-cell interaction studies. Custom image analysis was developed to measure cell viability and protein subcellular localizations in single cells to provide insights into heterogeneity of cellular responses. We validated our platform by assessing viability and nuclear translocations of NF-κB and STAT3 in multiple myeloma cells exposed to different conditions, including cocultured bone marrow stromal cells. We further assessed its utility by analyzing NF-κB activation in a primary chronic lymphocytic leukemia patient sample. Our platform can be applied to myriad biological questions, enabling high-content functional cytomics of primary hematologic malignancies.

Indexed as

Cell CommunicationCellular MicroenvironmentActive Transport, Cell NucleusAntineoplastic AgentsBone Marrow CellsBoronic AcidsBortezomibCell Line, TumorCell NucleusCells, CulturedCell SurvivalCoculture TechniquesDose-Response Relationship, DrugHematologic NeoplasmsHumansImmunohistochemistryAntineoplastic AgentsBoronic AcidsBortezomibNF-kappa BPyrazinesSTAT3 Transcription FactorTumor Necrosis Factor-alpha

Identifiers

PMID22262772
PMCPMC3311264
OpenAlexW2074948314

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.