Evidence map›Paper›PMID 22260931›Full record

ReviewCurrent opinion in chemical biology2012

Current developments and challenges in the search for a naturally selected Diels-Alderase.

Hak Joong Kim, Mark W Ruszczycky, Hung-wen Liu

Abstract readReview
In one paragraph

Review in Current opinion in chemical biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Peculiarities of meroterpenoids and their bioproduction.Applied microbiology and biotechnology · 2021
    Review
  5. Catalytic mechanism andNature catalysis · 2021
    Article
  6. Article
  7. Natural products as inspiration for the development of new synthetic methods.Journal of the Chinese Chemical Society. Zhongguo hua xue hui (Taipei, Taiwan) · 2018
    Article
  8. Article
  9. Structural insights into enzymatic [4+2]Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  10. Natural [4 + 2]-Cyclases.Chemical reviews · 2017
    Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Natural Diels-Alderases: Elusive and Irresistable.The Journal of organic chemistry · 2015
    Article
  17. Quo vadis, enzymology?Nature chemical biology · 2015
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hak Joong KimDivision of Medicinal Chemistry, College of Pharmacy, and Department of Chemistry and Biochemistry, University of Texas at Austin, Austin, TX 78712, United States.
Mark W Ruszczycky
Hung-wen Liu

Funding

Three-Membered Ring Metabolites, Inhibition &FormationR01GM040541 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI LIU, HUNG-WEN · 1989 to 2023
$7.4M
Mechanistic Studies of Deoxy Sugar BiosynthesisR01GM035906 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI LIU, HUNG-WEN · 1986 to 2023
$6.1M
MECHANISMS OF BIOSYNTHETIC FORMATION OF DEOXY SUGARSR37GM035906 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI LIU, HUNG-WEN · 1999 to 2008
$3.4M
Mechanistic Investigation of the Radical SAM Deaminase DesllF32AI082906 · NIAID · UNIVERSITY OF TEXAS AT AUSTIN · PI RUSZCZYCKY, MARK W. · 2009 to 2010
$106k
NIAID NIH HHS F32 AI082906NIAID NIH HHS F32AI082906NIGMS NIH HHS GM035906NIGMS NIH HHS GM040541NIGMS NIH HHS R01 GM035906NIGMS NIH HHS R01 GM040541NIGMS NIH HHS R37 GM035906
6 · The paper itself

Abstract

Only a very few examples of enzymes known to catalyze pericyclic reactions have been reported, and presently no enzyme has been demonstrated unequivocally to catalyze a Diels-Alder reaction. Nevertheless, research into secondary metabolism has led to the discovery of numerous natural products exhibiting the structural hallmarks of [4+2] cycloadditions, prompting efforts to characterize the responsible enzymatic processes. These efforts have resulted in a growing collection of enzymes believed to catalyze pericyclic [4+2] cycloaddition reactions; however, in each case the complexity of the substrates and catalytic properties of these enzymes poses significant challenges in substantiating these hypotheses. Herein we consider the principles motivating these efforts and the enzymological systems currently under investigation.

Indexed as

AldehydesBiocatalysisBiological ProductsCyclization3-hydroxybutanalAldehydesBiological Products

Identifiers

PMID22260931
PMCPMC3328600

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.