Evidence map›Paper›PMID 22258617›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2012

ENU mutagenesis in mice identifies candidate genes for hypogonadism.

Jeffrey Weiss, Lisa A Hurley, Rebecca M Harris, Courtney Finlayson, Minghan Tong, Lisa A Fisher, Jennifer L Moran, David R Beier, Christopher Mason, J Larry Jameson

Abstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Pathogenic variants of meiotic double strand break (DSB) formation genes PRDM9 and ANKRD31 in premature ovarian insufficiency.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Disorders of sex development: new genes, new concepts.Nature reviews. Endocrinology · 2013
    Review
  11. Article
  12. Specificity factors in cytoplasmic polyadenylation.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Jeffrey WeissDivision of Endocrinology, Department of Medicine, Northwestern University Feinberg School of Medicine, 303 E. Superior Street, Chicago, IL 60611, USA. jeff-weiss@northwestern.edu
Lisa A Hurley
Rebecca M Harris
Courtney Finlayson
Minghan Tong
Lisa A Fisher
Jennifer L Moran
David R Beier
Christopher Mason
J Larry Jameson
Northwestern University · USBrigham and Women's Hospital · USCornell University · USHarvard University · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
MULTIDISCIPLINARY CLINICAL AND TRANSLATIONAL SCIENCE (MCTS) PROGRAM (UL1)UL1RR025741 · NCRR · NORTHWESTERN UNIVERSITY AT CHICAGO · PI GREENLAND, PHILIP · 2008 to 2011
$24.7M
Genetic Analysis of Developmental MutationsU01HD043430 · NICHD · BRIGHAM AND WOMEN'S HOSPITAL · PI BEIER, DAVID R. · 2002 to 2007
$5.5M
Identify Sex Determination Genes By ENU MutagenesisU01HD043425 · NICHD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI JAMESON, JAMES LARRY · 2002 to 2006
$2.5M
NCI NIH HHS CA060553NCI NIH HHS P30 CA060553NCRR NIH HHS UL1 RR025741NICHD NIH HHS U01 HD043425NICHD NIH HHS U01 HD043430NICHD NIH HHS U01 HD43430
6 · The paper itself

Abstract

Genome-wide mutagenesis was performed in mice to identify candidate genes for male infertility, for which the predominant causes remain idiopathic. Mice were mutagenized using N-ethyl-N-nitrosourea (ENU), bred, and screened for phenotypes associated with the male urogenital system. Fifteen heritable lines were isolated and chromosomal loci were assigned using low-density genome-wide SNP arrays. Ten of the 15 lines were pursued further using higher-resolution SNP analysis to narrow the candidate gene regions. Exon sequencing of candidate genes identified mutations in mice with cystic kidneys (Bicc1), cryptorchidism (Rxfp2), restricted germ cell deficiency (Plk4), and severe germ cell deficiency (Prdm9). In two other lines with severe hypogonadism, candidate sequencing failed to identify mutations, suggesting defects in genes with previously undocumented roles in gonadal function. These genomic intervals were sequenced in their entirety and a candidate mutation was identified in SnrpE in one of the two lines. The line harboring the SnrpE variant retains substantial spermatogenesis despite small testis size, an unusual phenotype. In addition to the reproductive defects, heritable phenotypes were observed in mice with ataxia (Myo5a), tremors (Pmp22), growth retardation (unknown gene), and hydrocephalus (unknown gene). These results demonstrate that the ENU screen is an effective tool for identifying potential causes of male infertility.

Indexed as

MutagenesisAnimalsEthylnitrosoureaHumansHypogonadismInfertility, MaleMaleMiceMice, Inbred C57BLProteinsEthylnitrosoureaProteins

Identifiers

PMID22258617
PMCPMC3358541
OpenAlexW2098646195

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.