Evidence map›Paper›PMID 22258187›Full record

ArticlePlant molecular biology2012

Towards a synthetic view of potato cold and salt stress response by transcriptomic and proteomic analyses.

D Evers, S Legay, D Lamoureux, J F Hausman, L Hoffmann, J Renaut

Abstract read
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In one paragraph

Article in Plant molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
14.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 96 citations in OpenAlex.

  1. Genetic Diversity of the Collection of Far EasternPlants (Basel, Switzerland) · 2024
    Article
  2. Article
  3. A Review of Potato Salt Tolerance.International journal of molecular sciences · 2023
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. NaGenomics, proteomics & bioinformatics · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Proteomic analysis of plasma membrane proteins in wheat roots exposed to phenanthrene.Environmental science and pollution research international · 2016
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

D EversDepartment of Environment and Agrobiotechnologies, Centre de Recherche Public-Gabriel Lippmann, 41, rue du Brill, 4422 Belvaux, Luxembourg. evers@lippmann.lu
S Legay
D Lamoureux
J F Hausman
L Hoffmann
J Renaut
Luxembourg Institute of Science and Technology · LU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Potato can suffer from several abiotic stresses such as cold temperature, high soil salinity, lack of water or heavy metal exposure, to name a few. They are known to affect plant growth as well as productivity, with differential regulations at several levels. Potato response to cold and salt exposure was investigated at both transcriptomic and proteomic levels in a growth chamber experiment. Cold exposure in potato resulted in a higher number of significantly differentially regulated genes compared to salt exposure, whereas there were nearly three times more differentially regulated proteins after salt exposure when compared to cold exposure. The allocation of up and down-regulated genes at the functional category level also differed between salt and cold exposure although common trends, previously described in various abiotic stresses, were observed. In both stresses, the majority of photosynthesis-related genes were down-regulated whereas cell rescue and transcription factor-related genes were mostly up-regulated. In the other functional categories no common trend was observed; salt exposure results displayed a strong down-regulation of genes implicated in primary metabolism, detoxication apparatus and signal transduction, whereas upon cold exposure, up and down-regulated genes were similar in number. At the proteomic level, the abundance of the majority of identified proteins was increased except for the photosynthesis-related proteins, which were mostly less abundant after both salt and cold exposure. Common responses between salt and cold stress and specific responses inherent to these abiotic stresses are described.

Indexed as

Gene Expression Regulation, PlantStress, PhysiologicalCold TemperatureGene Expression ProfilingGenes, PlantOligonucleotide Array Sequence AnalysisPlant ProteinsProteomicsSalt ToleranceSolanum tuberosumPlant Proteins

Identifiers

PMID22258187
OpenAlexW2126846879

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.