Evidence map›Paper›PMID 22257308›Full record

ArticleMolecular plant pathology2012

The ColRS system of Xanthomonas oryzae pv. oryzae is required for virulence and growth in iron-limiting conditions.

Sujatha Subramoni, Alok Pandey, M R Vishnu Priya, Hitendra Kumar Patel, Ramesh V Sonti

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. TheMicroorganisms · 2021
    Article
  5. Review
  6. Secrete or perish: The role of secretion systems inComputational and structural biotechnology journal · 2021
    Review
  7. Pathogens (Basel, Switzerland) · 2020
    Article
  8. Genetic and structural determinants on iron assimilation pathways in the plant pathogen Xanthomonas citri subsp. citri and Xanthomonas sp.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Review
  9. Article
  10. EvaluatingPeerJ · 2020
    Article
  11. Article
  12. TheFrontiers in microbiology · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. CitB is required for full virulence of Xanthomonas oryzae pv. oryzae.World journal of microbiology & biotechnology · 2015
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Sujatha SubramoniCentre for Cellular and Molecular Biology, Council of Scientific and Industrial Research, Hyderabad-500 007, Andhra Pradesh, India.
Alok Pandey
M R Vishnu Priya
Hitendra Kumar Patel
Ramesh V Sonti
Centre for Cellular and Molecular Biology · INUniversity of Calgary · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Xanthomonas oryzae pv. oryzae, the causal agent of bacterial blight of rice, produces siderophores only under iron-limiting conditions. We screened 15 400 mTn5-induced mutants of X. oryzae pv. oryzae and isolated 27 mutants that produced siderophores even under iron-replete conditions. We found that the mTn5 insertions in 25 of these mutants were in or close to six genes. Mutants with insertions in five of these genes [colS, XOO1806 (a conserved hypothetical protein), acnB, prpR and prpB] exhibited a deficiency for growth on iron-limiting medium and a decrease in virulence. Insertions in a sixth gene, XOO0007 (a conserved hypothetical protein), were found to affect the ability to grow on iron-limiting medium, but did not affect the virulence. Targeted gene disruptants for colR (encoding the predicted cognate regulatory protein for ColS) also exhibited a deficiency for growth on iron-limiting medium and a decrease in virulence. colR and colS mutants were defective in the elicitation of hypersensitive response symptoms on the nonhost tomato. In addition, colR and colS mutants induced a rice basal defence response, suggesting that they are compromised in the suppression of host innate immunity. Quantitative reverse transcription-polymerase chain reaction (RT-PCR) analysis demonstrated that a functional ColRS system is required for the optimal expression of several genes encoding components of the type 3 secretion system (T3SS) of X. oryzae pv. oryzae. Our results demonstrate the role of several novel genes, including colR/colS, in the promotion of growth on iron-limiting medium and the virulence of X. oryzae pv. oryzae.

Indexed as

Bacterial ProteinsGene Expression Regulation, BacterialGenes, BacterialIronMutagenesis, InsertionalMutationOpen Reading FramesPhenotypeSequence Analysis, DNASiderophoresSolanum lycopersicumVirulenceXanthomonasBacterial ProteinsIronSiderophores

Identifiers

PMID22257308
PMCPMC6638901
OpenAlexW1803501274

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.