Evidence map›Paper›PMID 22254975›Full record

ArticleAnnual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference2011

Modeling two-photon calcium fluorescence of episodic V1 recordings using multifrequency analysis.

Henry W Zheng, Wasim Q Malik, Caroline A Runyan, Mriganka Sur, Emery N Brown

Abstract read
In one paragraph

Article in Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Henry W ZhengYale University, New Haven, CT 06520, USA. henry.zheng@yale.edu
Wasim Q Malik
Caroline A Runyan
Mriganka Sur
Emery N Brown

Funding

Dynamic Inverse Solutions for Multimodal ImagingR01EB006385 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI BOAS, DAVID A · 2007 to 2011
$6.7M
STRUCTURE AND FUNCTION IN THE RETINOGENICULATE PATHWAYR01EY007023 · NEI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI SUR, MRIGANKA · 1985 to 2018
$5.6M
A Systems Neuroscience Approach for the Study of General AnesthesiaDP1OD003646 · OD · MASSACHUSETTS GENERAL HOSPITAL · PI BROWN, EMERY N · 2007 to 2011
$4.4M
Structural correlates of rapid cortical plasticityR01EY017098 · NEI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SUR, MRIGANKA · 2006 to 2010
$2.1M
NEUROTROPHIC REQUIREMENTS OF DEVELOPING OCULAR MOTONEUROF32EY007023 · NEI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI MACDONALD, MELANIE L · 1999 to 2000
$38k
NEI NIH HHS EY07023NEI NIH HHS F32 EY007023NEI NIH HHS R01 EY007023NEI NIH HHS R01 EY017098NIBIB NIH HHS R01 EB006385NIH HHS DP1 OD003646
6 · The paper itself

Abstract

The use of two-photon microscopy allows for imaging of deep neural tissue in vivo. This paper examines frequency-based analysis to two-photon calcium fluorescence images with the goal of deriving smooth tuning curves. We present a multifrequency analysis approach for improved extraction of calcium responses in episodic stimulation experiments, that is, when the stimulus is applied for a number of frames, then turned off for the next few frames, and so on. Episodic orientation stimulus was applied while recording from the primary visual cortex of an anesthetized mouse. The multifrequency model demonstrated improved tuning curve descriptions of the neurons. It also offers perspective regarding the characteristics of calcium fluorescence imaging of the brain.

Indexed as

PhotonsAnimalsCalciumFluorescenceModels, TheoreticalCalcium

Identifiers

PMID22254975
PMCPMC4374803

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.