Evidence map›Paper›PMID 22253740›Full record

ArticlePloS one2012

Genetic interactions between chromosomes 11 and 18 contribute to airway hyperresponsiveness in mice.

Caroline M Ferreira, James L Chen, Jianrong Li, Kazuhiro Shimomura, Xinan Yang, Yves A Lussier, Lawrence H Pinto, Julian Solway

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Prophylactic Supplementation ofFrontiers in microbiology · 2017
    Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Caroline M FerreiraDepartment of Medicine, University of Chicago, Chicago, Illinois, United States of America.
James L Chen
Jianrong Li
Kazuhiro Shimomura
Xinan Yang
Yves A Lussier
Lawrence H Pinto
Julian Solway

Funding

Nation Center: Multi-Scale Study- Cellular Networks(RMI)U54CA121852 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2005 to 2015
$37.4M
TRANSLATIONAL RESEARCH UNIVERSITY OF CHICAGO: CLINICAL TRIALSUL1RR024999 · NCRR · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2007 to 2011
$25.3M
Plasticity Regulation of Contracted Airway Smooth MuscleR01HL079398 · NHLBI · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2005 to 2008
$1.4M
Semantic Approaches to Phenotypic Databases AnalysesK22LM008308 · NLM · UNIVERSITY OF CHICAGO · PI LUSSIER, YVES A · 2004 to 2006
$468k
NCI NIH HHS U54 CA121852NCI NIH HHS U54CA121852-5NCRR NIH HHS UL1 RR024999NCRR NIH HHS UL1RR024999-04NHLBI NIH HHS R01 HL079398NHLBI NIH HHS R01HL079398NLM NIH HHS K22 LM008308NLM NIH HHS K22LM008308
6 · The paper itself

Abstract

We used two-dimensional quantitative trait locus analysis to identify interacting genetic loci that contribute to the native airway constrictor hyperresponsiveness to methacholine that characterizes A/J mice, relative to C57BL/6J mice. We quantified airway responsiveness to intravenous methacholine boluses in eighty-eight (C57BL/6J X A/J) F₂ and twenty-seven (A/J X C57BL/6J) F₂ mice as well as ten A/J mice and six C57BL/6J mice; all studies were performed in male mice. Mice were genotyped at 384 SNP markers, and from these data two-QTL analyses disclosed one pair of interacting loci on chromosomes 11 and 18; the homozygous A/J genotype at each locus constituted the genetic interaction linked to the hyperresponsive A/J phenotype. Bioinformatic network analysis of potential interactions among proteins encoded by genes in the linked regions disclosed two high priority subnetworks--Myl7, Rock1, Limk2; and Npc1, Npc1l1. Evidence in the literature supports the possibility that either or both networks could contribute to the regulation of airway constrictor responsiveness. Together, these results should stimulate evaluation of the genetic contribution of these networks in the regulation of airway responsiveness in humans.

Indexed as

Genetic Predisposition to DiseaseAnimalsBronchial HyperreactivityChromosomes, MammalianCrosses, GeneticFemaleLod ScoreMaleMiceMice, Inbred C57BLPolymorphism, Single NucleotideProtein Interaction MapsQuantitative Trait Loci

Identifiers

PMID22253740
PMCPMC3254621

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.