Evidence map›Paper›PMID 22253616›Full record

ArticleInternational journal of plant genomics2011

POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data.

Ethalinda K S Cannon, Scott M Birkett, Bremen L Braun, Sateesh Kodavali, Douglas M Jennewein, Alper Yilmaz, Valentin Antonescu, Corina Antonescu, Lisa C Harper, Jack M Gardiner and 12 more

Abstract read
In one paragraph

Article in International journal of plant genomics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. The unusualProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  5. Article
  6. Communications biology · 2019
    Article
  7. Article
  8. Genetic analysis of resistance to six virus diseases in a multiple virus-resistant maize inbred line.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014
    Article
  9. Article
  10. Article
  11. Chromosome visualization tool: a whole genome viewer.International journal of plant genomics · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Ethalinda K S CannonDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, IA 50011, USA.
Scott M Birkett
Bremen L Braun
Sateesh Kodavali
Douglas M Jennewein
Alper Yilmaz
Valentin Antonescu
Corina Antonescu
Lisa C Harper
Jack M Gardiner
Mary L Schaeffer
Darwin A Campbell
Carson M Andorf
Destri Andorf
Damon Lisch
Karen E Koch
Donald R McCarty
John Quackenbush
Erich Grotewold
Carol M Lushbough
Taner Z Sen
Carolyn J Lawrence

Funding

Postdoctoral Training in Cancer GeneticsT32CA106196 · NCI · OHIO STATE UNIVERSITY · PI DE LA CHAPELLE, ALBERT · 2004 to 2013
$3.6M
NCI NIH HHS T32 CA106196
6 · The paper itself

Abstract

The purpose of the online resource presented here, POPcorn (Project Portal for corn), is to enhance accessibility of maize genetic and genomic resources for plant biologists. Currently, many online locations are difficult to find, some are best searched independently, and individual project websites often degrade over time-sometimes disappearing entirely. The POPcorn site makes available (1) a centralized, web-accessible resource to search and browse descriptions of ongoing maize genomics projects, (2) a single, stand-alone tool that uses web Services and minimal data warehousing to search for sequence matches in online resources of diverse offsite projects, and (3) a set of tools that enables researchers to migrate their data to the long-term model organism database for maize genetic and genomic information: MaizeGDB. Examples demonstrating POPcorn's utility are provided herein.

Identifiers

PMID22253616
PMCPMC3255282

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.