Evidence map›Paper›PMID 22252557›Full record

ArticleNature communications2012

ELL facilitates RNA polymerase II pause site entry and release.

Jung S Byun, Temesgen D Fufa, Clay Wakano, Alfonso Fernandez, Cynthia M Haggerty, Myong-Hee Sung, Kevin Gardner

Open access · hybridAbstract read
In one paragraph

Article in Nature communications, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 47 citations in OpenAlex.

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  10. DBC1, p300, HDAC3, and Siah1 coordinately regulate ELL stability and function for expression of its target genes.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jung S ByunLaboratory of Receptor Biology and Gene Expression, National Cancer Institute, Bethesda, Maryland 20892, USA.
Temesgen D Fufa
Clay Wakano
Alfonso Fernandez
Cynthia M Haggerty
Myong-Hee Sung
Kevin Gardner
National Cancer Institute · US

Funding

Mechanisms of Transcriptional Control by p300ZIABC010846 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GARDNER, KEVIN · 2009 to 2017
$4.8M
Intramural NIH HHS
6 · The paper itself

Abstract

Transcription is a multi-stage process that coordinates several steps within the transcription cycle including chromatin reorganization, RNA polymerase II recruitment, initiation, promoter clearance and elongation. Recent advances have identified the super elongation complex, containing the eleven-nineteen lysine-rich leukaemia (ELL) protein, as a key regulator of transcriptional elongation. Here we show that ELL has a diverse and kinetically distinct role before its assembly into the super elongation complex by stabilizing Pol II recruitment/initiation and entry into the pause site. Loss of ELL destabilizes the pre-initiation complexes and results in disruption of early elongation and promoter proximal chromatin structure before recruitment of AFF4 and other super elongation complex components. These changes result in significantly reduced transcriptional activation of rapidly induced genes. Thus, ELL has an early and essential role during rapid high-amplitude gene expression that is required for both Pol II pause site entry and release.

Indexed as

Binding SitesChromatinChromatin ImmunoprecipitationGene Expression RegulationHEK293 CellsHistonesHumansJurkat CellsKineticsModels, BiologicalOligonucleotide Array Sequence AnalysisPhosphorylationPromoter Regions, GeneticRNA InterferenceRNA Polymerase IITranscriptional Elongation FactorsChromatinELL protein, humanHistonesRNA Polymerase IITranscriptional Elongation Factors

Identifiers

PMID22252557
PMCPMC3272570
OpenAlexW1986436415

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.