Evidence map›Paper›PMID 22249449›Full record

ArticleThe Journal of experimental medicine2012

Age, microbiota, and T cells shape diverse individual IgA repertoires in the intestine.

Cornelia Lindner, Benjamin Wahl, Lisa Föhse, Sebastian Suerbaum, Andrew J Macpherson, Immo Prinz, Oliver Pabst

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 122 papers.

0numbers the graph read from it
0cells of the map it votes in
122citing papers in PubMed
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

122 citing papers in PubMed, 225 citations in OpenAlex.

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  11. Moderate Aerobic Exercise Induces Homeostatic IgA Generation in Senile Mice.International journal of molecular sciences · 2024
    Article
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  16. The Underappreciated Role of Secretory IgA in IBD.Inflammatory bowel diseases · 2023
    Article
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  18. Human intestinal B cells in inflammatory diseases.Nature reviews. Gastroenterology & hepatology · 2023
    Review
  19. The function of γδ T cells in humoral immune responses.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2023
    Review
  20. Article

62 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Cornelia LindnerInstitute of Immunology, Hannover Medical School, 30625 Hannover, Germany.
Benjamin Wahl
Lisa Föhse
Sebastian Suerbaum
Andrew J Macpherson
Immo Prinz
Oliver Pabst
Medizinische Hochschule Hannover · DEInstitute of Immunology · HRUniversity of Bern · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intestinal immunoglobulin A (IgA) ensures host defense and symbiosis with our commensal microbiota. Yet previous studies hint at a surprisingly low diversity of intestinal IgA, and it is unknown to what extent the diverse Ig arsenal generated by somatic recombination and diversification is actually used. In this study, we analyze more than one million mouse IgA sequences to describe the shaping of the intestinal IgA repertoire, its determinants, and stability over time. We show that expanded and infrequent clones combine to form highly diverse polyclonal IgA repertoires with very little overlap between individual mice. Selective homing allows expanded clones to evenly seed the small but not large intestine. Repertoire diversity increases during aging in a dual process. On the one hand, microbiota-, T cell-, and transcription factor RORγt-dependent but Peyer's patch-independent somatic mutations drive the diversification of expanded clones, and on the other hand, new clones are introduced into the repertoire of aged mice. An individual's IgA repertoire is stable and recalled after plasma cell depletion, which is indicative of functional memory. These data provide a conceptual framework to understand the dynamic changes in the IgA repertoires to match environmental and intrinsic stimuli.

Indexed as

AgingAnalysis of VarianceAnimalsBase SequenceCluster AnalysisComplementarity Determining RegionsDNA PrimersEnzyme-Linked Immunospot AssayFlow CytometryGenetic VariationImmunoglobulin AIntestine, SmallMiceMice, Inbred C57BLMice, KnockoutMicroscopy, FluorescenceCC chemokine receptor 9Complementarity Determining RegionsDNA PrimersImmunoglobulin AReceptors, CCR

Identifiers

PMID22249449
PMCPMC3280880
OpenAlexW2153479249

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.