Evidence map›Paper›PMID 22248381›Full record

ArticleJournal of proteome research2012

Proteomic study of the mucin granulae in an intestinal goblet cell model.

Ana M Rodríguez-Piñeiro, Sjoerd van der Post, Malin E V Johansson, Kristina A Thomsson, Alexey I Nesvizhskii, Gunnar C Hansson

Abstract read
In one paragraph

Article in Journal of proteome research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. mBio · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Reprogrammed and transmissible intestinal microbiota confer diminished susceptibility to induced colitis in TMF-/- mice.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Ana M Rodríguez-PiñeiroDepartment of Medical Biochemistry and Cell Biology, University of Gothenburg , Box 440, 40530 Gothenburg, Sweden.
Sjoerd van der Post
Malin E V Johansson
Kristina A Thomsson
Alexey I Nesvizhskii
Gunnar C Hansson
University of Gothenburg · SEMichigan United · USUniversity of Michigan–Ann Arbor · US

Funding

COMPUTATIONAL TOOLS FOR MASS SPECTROMETRY-BASED INTERACTOME DATAR01GM094231 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Alexey I Nesvizhskii · 2010 to 2026
$5.4M
The MUC2 Mucus Gel as an Innate Immune Mechanism that Inhibits InflammationU01AI095473 · NIAID · GOTEBORG UNIVERSITY · PI HANSSON, GUNNAR C., JOHANSSON, MALIN E.V. · 2011 to 2020
$2.6M
NIAID NIH HHS U01 AI095473NIGMS NIH HHS R01 GM094231
6 · The paper itself

Abstract

Goblet cells specialize in producing and secreting mucus with its main component, mucins. An inducible goblet-like cell line was used for the purification of the mucus vesicles stored in these cells by density gradient ultracentrifugation, and their proteome was analyzed by nanoLC-MS and MS/MS. Although the density of these vesicles coincides with others, it was possible to reveal a number of proteins that after immunolocalization on colon tissue and functional analyses were likely to be linked to the MUC2 vesicles. Most of the proteins were associated with the vesicle membrane or their outer surface. The ATP6AP2, previously suggested to be associated with vesicular proton pumps, was colocalized with MUC2 without other V-ATPase proteins and, thus, probably has roles in mucin vesicle function yet to be discovered. FAM62B, known to be a calcium-sensitive protein involved in vesicle fusion, also colocalized with the MUC2 vesicles and is probably involved in unknown ways in the later events of the MUC2 vesicles and their secretion.

Indexed as

Cells, CulturedCentrifugation, Density GradientColon, SigmoidGoblet CellsHumansMucin-2Peptide FragmentsPrincipal Component AnalysisProrenin ReceptorProtein BindingProtein Interaction MappingProtein TransportProteomicsrab3A GTP-Binding ProteinReceptors, Cell SurfaceR-SNARE ProteinsATP6AP2 protein, humanESYT2 protein, humanMUC2 protein, humanMucin-2Peptide FragmentsProrenin Receptorrab3A GTP-Binding ProteinReceptors, Cell SurfaceR-SNARE ProteinsSynaptotagminsVacuolar Proton-Translocating ATPasesVAMP7 protein, humanVAMP8 protein, human

Identifiers

PMID22248381
PMCPMC3292267
OpenAlexW8347474

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.