ArticlePloS one2012
A high resolution genetic map anchoring scaffolds of the sequenced watermelon genome.
Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.
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Who cites it
61 citing papers in PubMed.
- Telomere-to-telomere Citrullus super-pangenome provides direction for watermelon breeding.Nature genetics · 2024Article
- Identification of allelic relationship and translocation region among chromosomal translocation lines that leads to less-seed watermelon.Horticulture research · 2024Article
- Comparative karyotype analysis of eight Cucurbitaceae crops using fluorochrome banding and 45S rDNA-FISH.Comparative cytogenetics · 2023Article
- Identification of a novel locusFrontiers in genetics · 2023Article
- Integrating Genetic and Chromosome Maps ofInternational journal of molecular sciences · 2022Article
- Assembly of complete diploid-phased chromosomes from draft genome sequences.G3 (Bethesda, Md.) · 2022Article
- Draft Sequencing Crested Wheatgrass Chromosomes Identified Evolutionary Structural Changes and Genes and Facilitated the Development of SSR Markers.International journal of molecular sciences · 2022Article
- QTL mapping identifies novel loci and putative candidate genes for rind traits in watermelon.3 Biotech · 2022Article
- A critical review on cytogenetics of Cucurbitaceae with updates on Indian taxa.Comparative cytogenetics · 2022Review
- Primary mapping of quantitative trait loci regulating multivariate horticultural phenotypes of watermelon (Frontiers in plant science · 2022Article
- The branchless gene Clbl in watermelon encoding a TERMINAL FLOWER 1 protein regulates the number of lateral branches.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- A Dual-Color Tyr-FISH Method for Visualizing Genes/Markers on Plant Chromosomes to Create Integrated Genetic and Cytogenetic Maps.International journal of molecular sciences · 2021Article
- Genome survey and high-resolution genetic map provide valuable genetic resources for Fenneropenaeus chinensis.Scientific reports · 2021Article
- Anchoring a genetic map of an interspecific backcross two family to the genome builds of Elaeis.Journal of genetics · 2021Article
- Genetic linkage map construction and quantitative trait loci mapping of agronomic traits in Gloeostereum incarnatum.Journal of microbiology (Seoul, Korea) · 2021Article
- Decreased Protein Abundance of LycopenePlant physiology · 2020Article
- Quantitative Trait Loci for Seed Size Variation in Cucurbits - A Review.Frontiers in plant science · 2020Review
- Detection and application of genome-wide variations in peach for association and genetic relationship analysis.BMC genetics · 2019Article
- Genome-Wide Variant Identification and High-Density Genetic Map Construction Using RADseq forG3 (Bethesda, Md.) · 2019Article
- Haplotype Networking of GWAS Hits for Citrulline Variation Associated with the Domestication of Watermelon.International journal of molecular sciences · 2019Article
1 more citing papers are in PubMed but not listed here.
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Authors and funding
12 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
As part of our ongoing efforts to sequence and map the watermelon (Citrullus spp.) genome, we have constructed a high density genetic linkage map. The map positioned 234 watermelon genome sequence scaffolds (an average size of 1.41 Mb) that cover about 330 Mb and account for 93.5% of the 353 Mb of the assembled genomic sequences of the elite Chinese watermelon line 97103 (Citrullus lanatus var. lanatus). The genetic map was constructed using an F(8) population of 103 recombinant inbred lines (RILs). The RILs are derived from a cross between the line 97103 and the United States Plant Introduction (PI) 296341-FR (C. lanatus var. citroides) that contains resistance to fusarium wilt (races 0, 1, and 2). The genetic map consists of eleven linkage groups that include 698 simple sequence repeat (SSR), 219 insertion-deletion (InDel) and 36 structure variation (SV) markers and spans ∼800 cM with a mean marker interval of 0.8 cM. Using fluorescent in situ hybridization (FISH) with 11 BACs that produced chromosome-specifc signals, we have depicted watermelon chromosomes that correspond to the eleven linkage groups constructed in this study. The high resolution genetic map developed here should be a useful platform for the assembly of the watermelon genome, for the development of sequence-based markers used in breeding programs, and for the identification of genes associated with important agricultural traits.
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