Evidence map›Paper›PMID 22247170›Full record

ArticleApplied and environmental microbiology2012

Extensive manipulation of caseicins A and B highlights the tolerance of these antimicrobial peptides to change.

Sarah Norberg, Paula M O'Connor, Catherine Stanton, R Paul Ross, Colin Hill, Gerald F Fitzgerald, Paul D Cotter

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sarah NorbergMicrobiology Department, University College Cork, Cork, Ireland.
Paula M O'Connor
Catherine Stanton
R Paul Ross
Colin Hill
Gerald F Fitzgerald
Paul D Cotter

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Caseicins A and B are low-molecular-weight antimicrobial peptides which are released by proteolytic digestion of sodium caseinate. Caseicin A (IKHQGLPQE) is a nine-amino-acid cationic peptide, and caseicin B (VLNENLLR) is a neutral eight-amino-acid peptide; both have previously been shown to exhibit antibacterial activity against a number of pathogens, including Cronobacter sakazakii. Previously, four variants of each caseicin which differed subtly from their natural counterparts were generated by peptide synthesis. Antimicrobial activity assays revealed that the importance of a number of the residues within the peptides was dependent on the strain being targeted. In this study, this engineering-based approach was expanded through the creation of a larger collection of 26 peptides which are altered in a variety of ways. The investigation highlights the generally greater tolerance of caseicin B to change, the fact that changes have a more detrimental impact on anti-Gram-negative activity, and the surprising number of variants which exhibit enhanced activity against Staphylococcus aureus.

Indexed as

Amino Acid SubstitutionAmino Acid SequenceAntimicrobial Cationic PeptidesCaseinsGram-Negative BacteriaGram-Positive BacteriaHydrophobic and Hydrophilic InteractionsMicrobial Sensitivity TestsMolecular Sequence DataPeptide FragmentsStaphylococcus aureusAntimicrobial Cationic Peptidescaseicin Acaseicin BCaseinsPeptide Fragments

Identifiers

PMID22247170
PMCPMC3302613

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.