Evidence map›Paper›PMID 22242136›Full record

ArticlePloS one2011

Pseudomonas aeruginosa PilY1 binds integrin in an RGD- and calcium-dependent manner.

Michael D L Johnson, Christopher K Garrett, Jennifer E Bond, Kimberly A Coggan, Matthew C Wolfgang, Matthew R Redinbo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 75 citations in OpenAlex.

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  13. Engagement of αFrontiers in microbiology · 2024
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  18. A noncanonical cytochromeProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. PilB fromProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Michael D L JohnsonDepartment of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Christopher K Garrett
Jennifer E Bond
Kimberly A Coggan
Matthew C Wolfgang
Matthew R Redinbo
University of North Carolina at Chapel Hill · USDuke Medical Center · US

Funding

Structure and Inhibition of the Conjugative DNA Relaxase-HelicaseR01AI078924 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI REDINBO, MATTHEW R · 2008 to 2012
$1.9M
NIAID NIH HHS AI078924NIAID NIH HHS R01 AI078924
6 · The paper itself

Abstract

PilY1 is a type IV pilus (tfp)-associated protein from the opportunistic pathogen Pseudomonas aeruginosa that shares functional similarity with related proteins in infectious Neisseria and Kingella species. Previous data have shown that PilY1 acts as a calcium-dependent pilus biogenesis factor necessary for twitching motility with a specific calcium binding site located at amino acids 850-859 in the 1,163 residue protein. In addition to motility, PilY1 is also thought to play an important role in the adhesion of P. aeruginosa tfp to host epithelial cells. Here, we show that PilY1 contains an integrin binding arginine-glycine-aspartic acid (RGD) motif located at residues 619-621 in the PilY1 from the PAK strain of P. aeruginosa; this motif is conserved in the PilY1s from the other P. aeruginosa strains of known sequence. We demonstrate that purified PilY1 binds integrin in vitro in an RGD-dependent manner. Furthermore, we identify a second calcium binding site (amino acids 600-608) located ten residues upstream of the RGD. Eliminating calcium binding from this site using a D608A mutation abolished integrin binding; in contrast, a calcium binding mimic (D608K) preserved integrin binding. Finally, we show that the previously established PilY1 calcium binding site at 851-859 also impacts the protein's association with integrin. Taken together, these data indicate that PilY1 binds to integrin in an RGD- and calcium-dependent manner in vitro. As such, P. aeruginosa may employ these interactions to mediate host epithelial cell binding in vivo.

Indexed as

Amino Acid MotifsAmino Acid SequenceBinding SitesCalciumConserved SequenceFimbriae ProteinsIntegrinsMolecular Sequence DataOligopeptidesProtein Bindingarginyl-glycyl-aspartic acidCalciumFimbriae ProteinsIntegrinsOligopeptidesPilY1 protein, Pseudomonas aeruginosa

Identifiers

PMID22242136
PMCPMC3248442
OpenAlexW2072296907

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.