Evidence map›Paper›PMID 22242001›Full record

ArticlePLoS genetics2011

Transcription is required to establish maternal imprinting at the Prader-Willi syndrome and Angelman syndrome locus.

Emily Y Smith, Christopher R Futtner, Stormy J Chamberlain, Karen A Johnstone, James L Resnick

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 1 synthesis or guideline pooled it, 80 citations in OpenAlex.

  1. Recommendations for the investigation of animal models of Prader-Willi syndrome.Mammalian genome : official journal of the International Mammalian Genome Society · 2013
    Guideline
  2. Trial
  3. Review
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Methylation status of hypothalamicFrontiers in endocrinology · 2022
    Article
  12. Genetic Studies on Mammalian DNA Methyltransferases.Advances in experimental medicine and biology · 2022
    Article
  13. Conservation of Imprinting and Methylation ofAnimals : an open access journal from MDPI · 2021
    Article
  14. Review
  15. Epigenetics in Prader-Willi Syndrome.Frontiers in genetics · 2021
    Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Emily Y SmithDepartment of Molecular Genetics and Microbiology, University of Florida College of Medicine, Gainesville, Florida, United States of America.
Christopher R Futtner
Stormy J Chamberlain
Karen A Johnstone
James L Resnick
University of Florida · USFlorida College · US

Funding

GENETIC COMPLEMENTATION OF A MOUSE MODEL FOR PWSR01HD037872 · NICHD · UNIVERSITY OF FLORIDA · PI RESNICK, JAMES L · 1999 to 2010
$2.2M
NICHD NIH HHS HD037872NICHD NIH HHS R01 HD037872
6 · The paper itself

Abstract

The Prader-Willi syndrome (PWS [MIM 17620]) and Angelman syndrome (AS [MIM 105830]) locus is controlled by a bipartite imprinting center (IC) consisting of the PWS-IC and the AS-IC. The most widely accepted model of IC function proposes that the PWS-IC activates gene expression from the paternal allele, while the AS-IC acts to epigenetically inactivate the PWS-IC on the maternal allele, thus silencing the paternally expressed genes. Gene order and imprinting patterns at the PWS/AS locus are well conserved from human to mouse; however, a murine AS-IC has yet to be identified. We investigated a potential regulatory role for transcription from the Snrpn alternative upstream exons in silencing the maternal allele using a murine transgene containing Snrpn and three upstream exons. This transgene displayed appropriate imprinted expression and epigenetic marks, demonstrating the presence of a functional AS-IC. Transcription of the upstream exons from the endogenous locus correlates with imprint establishment in oocytes, and this upstream exon expression pattern was conserved on the transgene. A transgene bearing targeted deletions of each of the three upstream exons exhibited loss of imprinting upon maternal transmission. These results support a model in which transcription from the Snrpn upstream exons directs the maternal imprint at the PWS-IC.

Indexed as

Genomic ImprintingAllelesAngelman SyndromeAnimalsDNA MethylationEpigenesis, GeneticExonsGene Expression RegulationGenetic LociHumansMiceMice, Inbred C57BLMice, TransgenicOocytesPrader-Willi SyndromeRNA, Messenger, StoredRNA, Messenger, StoredsnRNP Core Proteins

Identifiers

PMID22242001
PMCPMC3248558
OpenAlexW2046993728

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.