Evidence map›Paper›PMID 22238063›Full record

ArticlePlant cell reports2012

Characterization and genetic analysis of an EIN4-like sequence (CaETR-1) located in QTL(AR1) implicated in ascochyta blight resistance in chickpea.

E Madrid, P N Rajesh, J Rubio, J Gil, T Millán, W Chen

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Article in Plant cell reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Ascochyta Blight in Chickpea: An Update.Journal of fungi (Basel, Switzerland) · 2023
    Review
  3. Review
  4. Novel Genomic Regions Linked toFrontiers in plant science · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Defence gene expression profiling to Ascochyta rabiei aggressiveness in chickpea.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

E MadridDepartamento de Genética, Universidad de Córdoba, Campus Rabanales, Edif. C5, 14071 Córdoba, Spain. b62mahee@uco.es
P N Rajesh
J Rubio
J Gil
T Millán
W Chen
University of Córdoba · ESWashington State University · USAndalusian Institute of Agricultural and Fisheries Research and Training · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two alleles of a chickpea (Cicer arietinum L.) ethylene receptor-like sequence (CaETR-1) were sequence-characterized using synteny analysis with genome sequences of Medicago truncatula L. The full length of the sequence obtained in the accession FLIP84-92C resistant to ascochyta blight (CaETR-1a) span 4,428 bp, including the polyadenylation signal in the 3'-untranslated region (UTR), whereas it has a 730 bp deletion in the 3'-UTR region in the susceptible accession PI359075 (CaETR-1b). The deduced protein belongs to subfamily II of the ethylene receptors and contains all the domains that define EIN4 homologs in Arabidopsis. The EIN4-like sequence (CaETR-1) has been mapped using a recombinant inbred line (RIL) population derived from an intraspecific cross between ILC3279 and WR315, resistant and susceptible to blight, respectively. The locus was located in LGIVa of the genetic map, flanked by markers NCPGR91 and GAA47 (at distances of 11.3 and 17.9 cM, respectively). This is the first potentially functional sequence identified under a QTL peak for ascochyta blight resistance in chickpea (QTL(AR1)). This EIN4-like (CaETR-1) sequence explained up to 33.8% of the total phenotypic variation. This sequence could be directly related to blight resistance, together with other QTLs that have been found to be involved in resistance to this major chickpea disease.

Indexed as

Amino Acid SequenceAscomycotaBase SequenceChromosome MappingCicerDisease ResistanceGenes, PlantInbreedingMolecular Sequence DataPhylogenyPlant DiseasesPlant ProteinsQuantitative Trait LociReceptors, Cell SurfaceRecombination, GeneticSequence Alignmentethylene receptors, plantPlant ProteinsReceptors, Cell Surface

Identifiers

PMID22238063
OpenAlexW2086896238

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.