Evidence map›Paper›PMID 22236369›Full record

ArticleVirology2012

Analysis of the interactions of viral and cellular factors with human cytomegalovirus lytic origin of replication, oriLyt.

Dominique Kagele, Cyprian C Rossetto, Margaret T Tarrant, Gregory S Pari

Abstract read
In one paragraph

Article in Virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dominique KageleUniversity of Nevada, Reno School of Medicine, Department of Microbiology & Immunology, Reno, NV 89557, USA.
Cyprian C Rossetto
Margaret T Tarrant
Gregory S Pari
University of Nevada, Reno · US

Funding

CHARACTERIZATION OF HCMV UL84R01AI045096 · NIAID · UNIVERSITY OF NEVADA RENO · PI ROSSETTO, CYPRIAN CONSTANCE · 2000 to 2014
$4.6M
NIAID NIH HHS R01 AI045096NIAID NIH HHS R01AI045096
6 · The paper itself

Abstract

Human cytomegalovirus transient lytic DNA replication relies on the cis-acting element oriLyt, six viral-encoded core proteins, the proposed DNA replication initiator protein UL84, IE2, IRS1 and the gene products from the UL112/113 loci. In an effort to elucidate cellular and viral-encoded factors that may play a role in oriLyt-dependent replication we used DNA-affinity purification and mass spectrometry to isolate and identify several previously unknown cellular and viral factors that interact with HCMV oriLyt DNA. These proteins include the multifunctional hnRNP-K, BUB3, HMGB1, PTB-1, UL83, UL112/113, and IRS1. Chromatin immunoprecipitation (ChIP) assays confirmed an interaction of several of these factors with oriLyt. Co-immunoprecipitation experiments detected an interaction between UL84 and hnRNP-K in infected and transfected cells. Knockdown of hnRNP K expression by siRNA inhibited the amplification of oriLyt in the transient assay. Together, these data suggest a possible regulatory role in DNA replication for several previously unidentified viral and cellular factors.

Indexed as

Host-Pathogen InteractionsReplication OriginVirus ReplicationCell Cycle ProteinsCell LineCytomegalovirusCytomegalovirus InfectionsDNA ReplicationHumansPoly-ADP-Ribose Binding ProteinsPolypyrimidine Tract-Binding ProteinProtein BindingViral ProteinsBUB3 protein, humanCell Cycle ProteinsoriLyt protein, Human cytomegalovirusPoly-ADP-Ribose Binding ProteinsPolypyrimidine Tract-Binding ProteinViral Proteins

Identifiers

PMID22236369
PMCPMC3288578
OpenAlexW2061570282

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.