Evidence map›Paper›PMID 22235805›Full record

ArticleBMC developmental biology2012

HOXA13 and HOXD13 expression during development of the syndactylous digits in the marsupial Macropus eugenii.

Keng Yih Chew, Hongshi Yu, Andrew J Pask, Geoffrey Shaw, Marilyn B Renfree

Open access · hybridAbstract read
In one paragraph

Article in BMC developmental biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

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  5. Cross-species comparisons andInterface focus · 2021
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  6. Homeotic Genes: Clustering, Modularity, and Diversity.Frontiers in cell and developmental biology · 2021
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  9. Limb development: a paradigm of gene regulation.Nature reviews. Genetics · 2017
    Review
  10. Article
  11. Molecular mechanism of Hoxd13-mediated congenital malformations in rat embryos.International journal of clinical and experimental pathology · 2015
    Article
  12. Review
  13. The role of self-organization in developmental evolution.Theory in biosciences = Theorie in den Biowissenschaften · 2014
    Article
  14. Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Keng Yih ChewARC Centre of Excellence in Kangaroo Genomics, The University of Melbourne, Melbourne, Victoria, 3010, Australia.
Hongshi Yu
Andrew J Pask
Geoffrey Shaw
Marilyn B Renfree
University of Melbourne · AUUniversity of Connecticut · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundKangaroos and wallabies have specialised limbs that allow for their hopping mode of locomotion. The hindlimbs differentiate much later in development but become much larger than the forelimbs. The hindlimb autopod has only four digits, the fourth of which is greatly elongated, while digits two and three are syndactylous. We investigated the expression of two genes, HOXA13 and HOXD13, that are crucial for digit patterning in mice during formation of the limbs of the tammar wallaby.

resultsWe describe the development of the tammar limbs at key stages before birth. There was marked heterochrony and the hindlimb developed more slowly than the forelimb. Both tammar HOXA13 and HOXD13 have two exons as in humans, mice and chickens. HOXA13 had an early and distal mRNA distribution in the tammar limb bud as in the mouse, but forelimb expression preceded that in the hindlimb. HOXD13 mRNA was expressed earlier in the forelimb than the hindlimb and was predominantly detected in the interdigital tissues of the forelimb. In contrast, the hindlimb had a more restricted expression pattern that appeared to be expressed at discrete points at both posterior and anterior margins of the limb bud, and was unlike expression seen in the mouse and the chicken.

conclusionsThis is the first examination of HOXA and HOXD gene expression in a marsupial. The gene structure and predicted proteins were highly conserved with their eutherian orthologues. Interestingly, despite the morphological differences in hindlimb patterning, there were no modifications to the polyalanine tract of either HOXA13 or HOXD13 when compared to those of the mouse and bat but there was a marked difference between the tammar and the other mammals in the region of the first polyserine tract of HOXD13. There were also altered expression domains for both genes in the developing tammar limbs compared to the chicken and mouse. Together these findings suggest that the timing of HOX gene expression may contribute to the heterochrony of the forelimb and hindlimb and that alteration to HOX domains may influence phenotypic differences that lead to the development of marsupial syndactylous digits.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsConserved SequenceEmbryo, MammalianEmbryonic DevelopmentExtremitiesFemaleGene ExpressionGene Expression Regulation, DevelopmentalHomeodomain ProteinsMacropodidaeMolecular Sequence DataPregnancyProtein Structure, TertiaryReal-Time Polymerase Chain Reactionhomeobox protein HOXA13Homeodomain Proteins

Identifiers

PMID22235805
PMCPMC3268106
OpenAlexW2009247091

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.