Evidence map›Paper›PMID 22234877›Full record

ArticleNucleic acids research2012

Structural mechanism of the phosphorylation-dependent dimerization of the MDC1 forkhead-associated domain.

Jinping Liu, Shukun Luo, Hongchang Zhao, Ji Liao, Jing Li, Chunying Yang, Bo Xu, David F Stern, Xingzhi Xu, Keqiong Ye

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Review
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  4. Molecular convergence by differential domain acquisition is a hallmark of chromosomal passenger complex evolution.Proceedings of the National Academy of Sciences of the United States of America · 2022
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  5. Review
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  9. Review
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  13. RNF126 Quenches RNF168 Function in the DNA Damage Response.Genomics, proteomics & bioinformatics · 2018
    Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Jinping LiuBeijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing 100048, China.
Shukun Luo
Hongchang Zhao
Ji Liao
Jing Li
Chunying Yang
Bo Xu
David F Stern
Xingzhi Xu
Keqiong Ye
Houston Methodist · USNational Institute of Biological Sciences, Beijing · CNChina Agricultural University · CNMethodist Hospital · US

Funding

PROTEIN KINASES IN YEAST DNA CHECKPOINT PATHWAYSR01CA082257 · NCI · YALE UNIVERSITY · PI STERN, DAVID F · 1999 to 2009
$2.3M
Mechanisms of Mitotic Activation of the ATM kinaseR01CA133093 · NCI · SOUTHERN RESEARCH INSTITUTE · PI XU, BO · 2009 to 2013
$1.4M
A Novel Pathway Involving ATM, PP1 and I-2R01ES016354 · NIEHS · SOUTHERN RESEARCH INSTITUTE · PI MITRA, SANKAR · 2009 to 2012
$1.1M
An HTS Assay for Inhibitors of NBS1-ATM InteractionsR21NS061748 · NINDS · SOUTHERN RESEARCH INSTITUTE · PI XU, BO · 2007 to 2007
$211k
NCI NIH HHS R01CA082257NCI NIH HHS R01CA133093NIEHS NIH HHS R01ES016354NINDS NIH HHS R21NS061748
6 · The paper itself

Abstract

MDC1 is a key mediator of the DNA-damage response in mammals with several phosphorylation-dependent protein interaction domains. The function of its N-terminal forkhead-associated (FHA) domain remains elusive. Here, we show with structural, biochemical and cellular data that the FHA domain mediates phosphorylation-dependent dimerization of MDC1 in response to DNA damage. Crystal structures of the FHA domain reveal a face-to-face dimer with pseudo-dyad symmetry. We found that the FHA domain recognizes phosphothreonine 4 (pT4) at the N-terminus of MDC1 and determined its crystal structure in complex with a pT4 peptide. Biochemical analysis further revealed that in the dimer, the FHA domain binds in trans to pT4 from the other subunit, which greatly stabilizes the otherwise unstable dimer. We show that T4 is phosphorylated primarily by ATM upon DNA damage. MDC1 mutants with the FHA domain deleted or impaired in its ability to dimerize formed fewer foci at DNA-damage sites, but the localization defect was largely rescued by an artificial dimerization module, suggesting that dimerization is the primary function of the MDC1 FHA domain. Our results suggest a novel mechanism for the regulation of MDC1 function through T4 phosphorylation and FHA-mediated dimerization.

Indexed as

Ataxia Telangiectasia Mutated ProteinsCell Cycle ProteinsCell Line, TumorDimerizationDNA-Binding ProteinsDNA DamageHumansIntracellular Signaling Peptides and ProteinsModels, MolecularMutationNuclear ProteinsPhosphorylationPhosphothreonineProtein Serine-Threonine KinasesProtein Structure, TertiaryTumor Suppressor ProteinsAtaxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsDNA-Binding ProteinsIntracellular Signaling Peptides and ProteinsNuclear ProteinsPhosphothreonineProtein Serine-Threonine KinasesTumor Suppressor Proteins

Identifiers

PMID22234877
PMCPMC3351156
OpenAlexW2172127266

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.