Evidence map›Paper›PMID 22232490›Full record

ArticleMolecular & cellular proteomics : MCP2012

Restricting fermentative potential by proteome remodeling: an adaptive strategy evidenced in Bacillus cereus.

Gérémy Clair, Jean Armengaud, Catherine Duport

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Cysteine Proteome Reveals Response to Endogenous Oxidative Stress inInternational journal of molecular sciences · 2021
    Article
  4. Article
  5. Assessing the ratio of Bacillus spores and vegetative cells by shotgun proteomics.Environmental science and pollution research international · 2021
    Article
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  7. Review
  8. Article
  9. Review
  10. Article
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  13. Article
  14. Article
  15. Article
  16. Adaptation inFrontiers in microbiology · 2016
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Gérémy ClairUniversité d'Avignon et des Pays de Vaucluse, UMR408, Sécurité et Qualité des Produits d'Origine Végétale, F-84000 Avignon, France.
Jean Armengaud
Catherine Duport
CEA Marcoule · FRSécurité et Qualité des Produits d'Origine Végétale · FRUniversité d'Avignon et des Pays de Vaucluse · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pathogenesis hinges on successful colonization of the gastrointestinal (GI) tract by pathogenic facultative anaerobes. The GI tract is a carbohydrate-limited environment with varying oxygen availability and oxidoreduction potential (ORP). How pathogenic bacteria are able to adapt and grow in these varying conditions remains a key fundamental question. Here, we designed a system biology-inspired approach to pinpoint the key regulators allowing Bacillus cereus to survive and grow efficiently under low ORP anoxic conditions mimicking those encountered in the intestinal lumen. We assessed the proteome components using high throughput nanoLC-MS/MS techniques, reconstituted the main metabolic circuits, constructed ΔohrA and ΔohrR mutants, and analyzed the impacts of ohrA and ohrR disruptions by a novel round of shotgun proteomics. Our study revealed that OhrR and OhrA are crucial to the successful adaptation of B. cereus to the GI tract environment. Specifically, we showed that B. cereus restricts its fermentative growth under low ORP anaerobiosis and sustains efficient aerobic respiratory metabolism, motility, and stress response via OhrRA-dependent proteome remodeling. Finally, our results introduced a new adaptive strategy where facultative anaerobes prefer to restrict their fermentative potential for a long term benefit.

Indexed as

FermentationAdaptation, PhysiologicalBacillus cereusBacterial ProteinsCarbohydrate MetabolismChromosome MappingGene Expression Regulation, BacterialGene Knockout TechniquesGenes, BacterialGenetic LociMicrobial ViabilityOperonOxidation-ReductionProteomeStress, PhysiologicalTranscription, GeneticBacterial ProteinsProteome

Identifiers

PMID22232490
PMCPMC3433916
OpenAlexW2011214792

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.