Evidence map›Paper›PMID 22231200›Full record

ArticlePlant signaling & behavior2011

Ascorbate peroxidase-related (APx-R) is not a duplicable gene.

Christophe Dunand, Catherine Mathé, Fernanda Lazzarotto, Rogério Margis, Marcia Margis-Pinheiro

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Article
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  9. Article
  10. A Novel L-ascorbate Peroxidase 6 Gene,Frontiers in plant science · 2017
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Christophe DunandUniversité de Toulouse, UPS; UMR 5546, Laboratoire de Recherche en Sciences Végétales, Castanet-Tolosan, France. christophe.dunand@lrsv.ups-tlse.fr
Catherine Mathé
Fernanda Lazzarotto
Rogério Margis
Marcia Margis-Pinheiro
Brazilian Computer Society · BRLaboratoire de Recherche en Sciences Végétales · FRUniversidade Federal do Rio Grande do Sul · BRUniversité Fédérale de Toulouse Midi-Pyrénées · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phylogenetic, genomic and functional analyses have allowed the identification of a new class of putative heme peroxidases, so called APx-R (APx-Related). These new class, mainly present in the green lineage (including green algae and land plants), can also be detected in other unicellular chloroplastic organisms. Except for recent polyploid organisms, only single-copy of APx-R gene was detected in each genome, suggesting that the majority of the APx-R extra-copies were lost after chromosomal or segmental duplications. In a similar way, most APx-R co-expressed genes in Arabidopsis genome do not have conserved extra-copies after chromosomal duplications and are predicted to be localized in organelles, as are the APx-R. The member of this gene network can be considered as unique gene, well conserved through the evolution due to a strong negative selection pressure and a low evolution rate.

Indexed as

Genes, DuplicateArabidopsisArabidopsis ProteinsAscorbate PeroxidasesConserved SequenceData MiningEvolution, MolecularGene Expression Regulation, PlantPhylogenyPloidiesArabidopsis ProteinsAscorbate Peroxidases

Identifiers

PMID22231200
PMCPMC3337176
OpenAlexW1989350916

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.