Evidence map›Paper›PMID 22230882›Full record

ArticleMolecular psychiatry2012

Machine learning and data mining: strategies for hypothesis generation.

M A Oquendo, E Baca-Garcia, A Artés-Rodríguez, F Perez-Cruz, H C Galfalvy, H Blasco-Fontecilla, D Madigan, N Duan

Abstract read
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In one paragraph

Article in Molecular psychiatry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Article
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  3. Review
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  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
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  16. Article
  17. Article
  18. Machine Learning With Neuroimaging: Evaluating Its Applications in Psychiatry.Biological psychiatry. Cognitive neuroscience and neuroimaging · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

M A OquendoDepartment of Psychiatry, New York State Psychiatric Institute and Columbia University, New York, NY 10032, USA. mao4@columbia.edu
E Baca-Garcia
A Artés-Rodríguez
F Perez-Cruz
H C Galfalvy
H Blasco-Fontecilla
D Madigan
N Duan

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Strategies for generating knowledge in medicine have included observation of associations in clinical or research settings and more recently, development of pathophysiological models based on molecular biology. Although critically important, they limit hypothesis generation to an incremental pace. Machine learning and data mining are alternative approaches to identifying new vistas to pursue, as is already evident in the literature. In concert with these analytic strategies, novel approaches to data collection can enhance the hypothesis pipeline as well. In data farming, data are obtained in an 'organic' way, in the sense that it is entered by patients themselves and available for harvesting. In contrast, in evidence farming (EF), it is the provider who enters medical data about individual patients. EF differs from regular electronic medical record systems because frontline providers can use it to learn from their own past experience. In addition to the possibility of generating large databases with farming approaches, it is likely that we can further harness the power of large data sets collected using either farming or more standard techniques through implementation of data-mining and machine-learning strategies. Exploiting large databases to develop new hypotheses regarding neurobiological and genetic underpinnings of psychiatric illness is useful in itself, but also affords the opportunity to identify novel mechanisms to be targeted in drug discovery and development.

Indexed as

Artificial IntelligenceData MiningModels, BiologicalHumansMental Disorders

Identifiers

PMID22230882

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.