Evidence map›Paper›PMID 22230768›Full record

ArticleJournal of neuroscience methods2012

Extracellular diffusion in laminar brain structures exemplified by hippocampus.

Aleksandr Saghyan, David P Lewis, Jan Hrabe, Sabina Hrabetova

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Sheet and void porous media models for brain interstitial space.Journal of the Royal Society, Interface · 2023
    Article
  3. Article
  4. Article
  5. Spatial Organization and Dynamics of the Extracellular Space in the Mouse Retina.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  6. Review
  7. Review
  8. Unveiling the Extracellular Space of the Brain: From Super-resolved Microstructure toThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Hyaluronan deficiency due to Has3 knock-out causes altered neuronal activity and seizures via reduction in brain extracellular space.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Aleksandr SaghyanDepartment of Physiology and Neuroscience, New York University School of Medicine, New York, NY, USA.
David P Lewis
Jan Hrabe
Sabina Hrabetova
Nathan Kline Institute for Psychiatric Research · USNew York University · US

Funding

Dynamic Microdomains in Brain Extracellular SpaceR01NS047557 · NINDS · SUNY DOWNSTATE MEDICAL CENTER · PI HRABETOVA, SABINA · 2004 to 2014
$2.6M
Dynamic Microdomains in Brain Extracellular SpaceR56NS047557 · NINDS · SUNY DOWNSTATE MEDICAL CENTER · PI HRABETOVA, SABINA · 2010 to 2010
$363k
NINDS NIH HHS R01 NS047557NINDS NIH HHS R56 NS047557
6 · The paper itself

Abstract

Numerous brain structures are composed of distinct layers and such stratification has a profound effect on extracellular diffusion transport in these structures. We have derived a more general form of diffusion equation incorporating inhomogeneities in both the extracellular volume fraction (α) and diffusion permeability (θ). A numerical solution of this equation for a special case of layered environment was employed to analyze diffusion in the CA1 region of hippocampus where stratum pyramidale occupied by the bodies of principal neurons is flanked by stratum radiatum and stratum oriens. Extracellular diffusion in the CA1 region was measured in vitro by real-time iontophoretic and real-time pressure methods, and numerical analysis found that stratum pyramidale had a significantly smaller extracellular volume fraction (α=0.127) and lower diffusion permeability (θ=0.327) than the other two layers (α=0.218, θ=0.447). Stratum pyramidale thus functioned as a diffusion barrier for molecules attempting to cross it. We also demonstrate that unless the detailed properties of all layers are taken into account when diffusion experiments are interpreted, the extracted apparent parameters of the extracellular space lose their physical meaning and capacity to describe any individual layer. Such apparent parameters depend on diffusion distance and direction, giving a false impression of microscopic anisotropy and non-Gaussian behavior. This finding has implications for all diffusion mediated physiological processes as well as for other diffusion methods including integrative optical imaging and diffusion-weighted magnetic resonance imaging.

Indexed as

AnimalsBiological TransportBrainCA1 Region, HippocampalComputer SystemsDiffusionExtracellular SpaceFemaleHippocampusIontophoresisMagnetic Resonance ImagingMicroelectrodesModels, StatisticalPermeabilityQuaternary Ammonium CompoundsRatsQuaternary Ammonium Compoundstetramethylammonium

Identifiers

PMID22230768
PMCPMC3288711
OpenAlexW2118526906

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.