Evidence map›Paper›PMID 22230464›Full record

ArticleMolecular oral microbiology2012

Metabolism of sugars by genetically diverse species of oral Leptotrichia.

J Thompson, A Pikis

Open access · bronzeAbstract read
In one paragraph

Article in Molecular oral microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification ofMicroorganisms · 2026
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  5. Review
  6. Article
  7. Article
  8. Journal of oral microbiology · 2022
    Article
  9. The Plaque Microbiota Community of Giant Panda (Frontiers in cellular and infection microbiology · 2022
    Article
  10. Article
  11. Article
  12. Article
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  14. Article
  15. Article
  16. Article
  17. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

J ThompsonMicrobial Biochemistry and Genetics Unit, Oral Infection and Immunity Branch, NIDCR, National Institutes of Health, Bethesda, MD 20892, USA. jthompson@dir.nidcr.nih.gov
A Pikis
Center for Drug Evaluation and Research · USNational Institute of Dental and Craniofacial Research · US

Funding

Regulation Of Sugar Transport And Metabolism In Oral BacteriaZIADE000341 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI THOMPSON, JOHN · 2009 to 2013
$1.8M
Intramural NIH HHS ZIA DE000341
6 · The paper itself

Abstract

Leptotrichia buccalis ATCC 14201 is a gram-negative, anaerobic rod-shaped bacterium resident in oral biofilm at the tooth surface. The sequenced genome of this organism reveals three contiguous genes at loci: Lebu_1525, Lebu_1526 and Lebu_1527. The translation products of these genes exhibit significant homology with phospho-α-glucosidase (Pagl), a regulatory protein (GntR) and a phosphoenol pyruvate-dependent sugar transport protein (EIICB), respectively. In non-oral bacterial species, these genes comprise the sim operon that facilitates sucrose isomer metabolism. Growth studies showed that L. buccalis fermented a wide variety of carbohydrates, including four of the five isomers of sucrose. Growth on the isomeric disaccharides elicited expression of a 50-kDa polypeptide comparable in size to that encoded by Lebu_1525. The latter gene was cloned, and the expressed protein was purified to homogeneity from Escherichia coli TOP10 cells. In the presence of two cofactors, NAD(+) and Mn(2+) ions, the enzyme readily hydrolyzed p-nitrophenyl-α-glucopyranoside 6-phosphate (pNPαG6P), a chromogenic analogue of the phosphorylated isomers of sucrose. By comparative sequence alignment, immunoreactivity and signature motifs, the enzyme can be assigned to the phospho-α-glucosidase (Pagl) clade of Family 4 of the glycosyl hydrolase super family. We suggest that the products of Lebu_1527 and Lebu_1525, catalyze the phosphorylative translocation and hydrolysis of sucrose isomers in L. buccalis, respectively. Four genetically diverse, but 16S rDNA-related, species of Leptotrichia have recently been described: L. goodfellowii, L. hofstadii, L. shahii and L. wadei. The phenotypic traits of these new species, with respect to carbohydrate utilization, have also been determined.

Indexed as

alpha-GlucosidasesBacterial ProteinsDental PlaqueDisaccharidasesDNA-Binding ProteinsGenes, BacterialGlycoside HydrolasesIsoenzymesLeptotrichiaMonosaccharide Transport ProteinsPhosphoenolpyruvate Sugar Phosphotransferase SystemPhosphorylationSpecies SpecificitySucrosealpha-GlucosidasesBacterial ProteinsDisaccharidasesDNA-Binding ProteinsGlycoside HydrolasesIsoenzymesMonosaccharide Transport ProteinsPhosphoenolpyruvate Sugar Phosphotransferase SystemSucrose

Identifiers

PMID22230464
PMCPMC3257818
OpenAlexW1544643600

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.