Evidence map›Paper›PMID 22229056›Full record

ArticlePloS one2011

A genomic reappraisal of symbiotic function in the aphid/Buchnera symbiosis: reduced transporter sets and variable membrane organisations.

Hubert Charles, Séverine Balmand, Araceli Lamelas, Ludovic Cottret, Vicente Pérez-Brocal, Béatrice Burdin, Amparo Latorre, Gérard Febvay, Stefano Colella, Federica Calevro and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
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  6. Adaptive Variation ofACS omega · 2021
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  11. Coordination of host and symbiont gene expression reveals a metabolic tug-of-war between aphids andProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Trading amino acids at the aphid-Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  13. Single-cell genomics unveiled a cryptic cyanobacterial lineage with a worldwide distribution hidden by a dinoflagellate host.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  14. Article
  15. Evolution of host support for two ancient bacterial symbionts with differentially degraded genomes in a leafhopper host.Proceedings of the National Academy of Sciences of the United States of America · 2018
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  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Hubert CharlesUMR203 BF2I, Biologie Fonctionnelle Insectes et Interactions, INSA-Lyon, INRA, Université de Lyon, Villeurbanne, France. hubert.charles@insa-lyon.fr
Séverine Balmand
Araceli Lamelas
Ludovic Cottret
Vicente Pérez-Brocal
Béatrice Burdin
Amparo Latorre
Gérard Febvay
Stefano Colella
Federica Calevro
Yvan Rahbé
Université Claude Bernard Lyon 1 · FRBiologie Fonctionnelle Insectes et Interactions · FRCentre Inria de l'Université Grenoble Alpes · FRDepartamento de Salud · ESUniversitat de València · ES

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Buchnera aphidicola is an obligate symbiotic bacterium that sustains the physiology of aphids by complementing their exclusive phloem sap diet. In this study, we reappraised the transport function of different Buchnera strains, from the aphids Acyrthosiphon pisum, Schizaphis graminum, Baizongia pistaciae and Cinara cedri, using the re-annotation of their transmembrane proteins coupled with an exploration of their metabolic networks. Although metabolic analyses revealed high interdependencies between the host and the bacteria, we demonstrate here that transport in Buchnera is assured by low transporter diversity, when compared to free-living bacteria, being mostly based on a few general transporters, some of which probably have lost their substrate specificity. Moreover, in the four strains studied, an astonishing lack of inner-membrane importers was observed. In Buchnera, the transport function has been shaped by the distinct selective constraints occurring in the Aphididae lineages. Buchnera from A. pisum and S. graminum have a three-membraned system and similar sets of transporters corresponding to most compound classes. Transmission electronic microscopic observations and confocal microscopic analysis of intracellular pH fields revealed that Buchnera does not show any of the typical structures and properties observed in integrated organelles. Buchnera from B. pistaciae seem to possess a unique double membrane system and has, accordingly, lost all of its outer-membrane integral proteins. Lastly, Buchnera from C. cedri revealed an extremely poor repertoire of transporters, with almost no ATP-driven active transport left, despite the clear persistence of the ancestral three-membraned system.

Indexed as

AnimalsAphidsBiological TransportBuchneraCell MembraneGenes, BacterialGenomicsHydrogen-Ion ConcentrationMembrane Transport ProteinsMetabolic Networks and PathwaysMicroscopy, ConfocalSymbiosisMembrane Transport Proteins

Identifiers

PMID22229056
PMCPMC3246468
OpenAlexW2071824241

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.