Evidence map›Paper›PMID 22228735›Full record

ArticleJournal of bacteriology2012

Regulation of bacteriocin production and cell death by the VicRK signaling system in Streptococcus mutans.

D B Senadheera, M Cordova, E A Ayala, L E Chávez de Paz, K Singh, J S Downey, G Svensäter, S D Goodman, D G Cvitkovitch

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 95 citations in OpenAlex.

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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

D B SenadheeraDental Research Institute, University of Toronto, Toronto, Ontario, Canada.
M Cordova
E A Ayala
L E Chávez de Paz
K Singh
J S Downey
G Svensäter
S D Goodman
D G Cvitkovitch
University of Toronto · CAUniversity of Southern California · USMalmö University · SE

Funding

The competence regulon in Streptococcus mutans biofilmsR01DE013230 · NIDCR · UNIVERSITY OF TORONTO · PI CVITKOVITCH, DENNIS G. · 1999 to 2011
$3.2M
CIHR MT15431NIDCR NIH HHS R01 DE013230NIDCR NIH HHS R01DE013230-03
6 · The paper itself

Abstract

The VicRK two-component signaling system modulates biofilm formation, genetic competence, and stress tolerance in Streptococcus mutans. We show here that the VicRK modulates bacteriocin production and cell viability, in part by direct modulation of competence-stimulating peptide (CSP) production in S. mutans. Global transcriptome and real-time transcriptional analysis of the VicK-deficient mutant (SmuvicK) revealed significant modulation of several bacteriocin-related loci, including nlmAB, nlmC, and nlmD (P < 0.001), suggesting a role for the VicRK in producing mutacins IV, V, and VI. Bacteriocin overlay assays revealed an altered ability of the vic mutants to kill related species. Since a well-conserved VicR binding site (TGTWAH-N(5)-TGTWAH) was identified within the comC coding region, we confirmed VicR binding to this sequence using DNA footprinting. Overexpression of the vic operon caused growth-phase-dependent repression of comC, comDE, and comX. In the vic mutants, transcription of nlmC/cipB encoding mutacin V, previously linked to CSP-dependent cell lysis, as well as expression of its putative immunity factor encoded by immB, were significantly affected relative to the wild type (P < 0.05). In contrast to previous reports that proposed a hyper-resistant phenotype for the VicK mutant in cell viability, the release of extracellular genomic DNA was significantly enhanced in SmuvicK (P < 0.05), likely as a result of increased autolysis compared with the parent. The drastic influence of VicRK on cell viability was also demonstrated using vic mutant biofilms. Taken together, we have identified a novel regulatory link between the VicRK and ComDE systems to modulate bacteriocin production and cell viability of S. mutans.

Indexed as

Cell DeathGene Expression Regulation, BacterialSignal TransductionBacterial ProteinsBacteriocinsDNA, BacterialDNA FootprintingGene DeletionGene Expression ProfilingHistidine KinaseProtein BindingProtein KinasesReal-Time Polymerase Chain ReactionStreptococcus mutansBacterial ProteinsBacteriocinsDNA, BacterialHistidine KinaseProtein KinasesYycF protein, Bacteria

Identifiers

PMID22228735
PMCPMC3294852
OpenAlexW1980760811

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.