Evidence map›Paper›PMID 22227860›Full record

ArticleThe protein journal2012

Halophilic properties of metal binding protein characterized by high histidine content from Chromohalobacter salexigens DSM3043.

Rui Yamaguchi, Tsutomu Arakawa, Hiroko Tokunaga, Matsujiro Ishibashi, Masao Tokunaga

Abstract read
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In one paragraph

Article in The protein journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Rui YamaguchiBiochemistry and Applied Biosciences, The United Graduate School of Agricultural Sciences, Kagoshima University, Korimoto, Kagoshima, Japan.
Tsutomu Arakawa
Hiroko Tokunaga
Matsujiro Ishibashi
Masao Tokunaga
Kagoshima University · JPAlliance Protein Laboratories (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Periplasmic metal binding protein characterized by high histidine content was cloned from moderate halophile, Chromohalobacter salexigens. The protein, termed histidine-rich metal binding protein (HP), was expressed in and purified from E. coli as a native form. HP bound to Ni- and Cu-loaded chelate columns with high affinity, and Co- and Zn-columns with moderate affinity. Although the secondary structure was not grossly altered by the addition of 0.2-2.0 M NaCl, the thermal transition pattern was considerably shifted to higher temperature with increasing salt concentration: melting temperature was raised by ~20 °C at 2.0 M NaCl over the melting temperature at 0.2 M NaCl. HP showed reversible refolding from thermal melting in 0.2-1.15 M NaCl, while it formed irreversible aggregates upon thermal melting at 2 M NaCl. Addition of 0.01-0.1 mM NiSO₄ stabilized HP against thermal melting with high reversibility, while addition above 0.5 mM resulted in irreversible melting due to aggregation.

Indexed as

Amino Acid SequenceBacterial ProteinsChromohalobacterCopperHalogensHistidineHistidine-Rich GlycoproteinHot TemperatureMolecular Sequence DataNickelPeriplasmic Binding ProteinsProtein ConformationProtein DenaturationProtein RefoldingProteinsProtein StabilityBacterial ProteinsCopperHalogensHistidineHistidine-Rich GlycoproteinNickelnickel sulfatePeriplasmic Binding ProteinsProteinsRecombinant ProteinsSaline Solution, Hypertonic

Identifiers

PMID22227860
OpenAlexW1987906721

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.