Evidence map›Paper›PMID 22225774›Full record

ArticleBMC biotechnology2012

Construction and transformation of a Thermotoga-E. coli shuttle vector.

Dongmei Han, Stephen M Norris, Zhaohui Xu

Abstract read
In one paragraph

Article in BMC biotechnology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Improvement of COMicroorganisms · 2021
    Article
  4. Physiological, metabolic and biotechnological features of extremely thermophilic microorganisms.Wiley interdisciplinary reviews. Systems biology and medicine · 2017
    Review
  5. Development of a pyrE-based selective system for Thermotoga sp. strain RQ7.Extremophiles : life under extreme conditions · 2017
    Article
  6. Article
  7. Complete genome sequence ofStandards in genomic sciences · 2017
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Thermophilic biohydrogen production: how far are we?Applied microbiology and biotechnology · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Dongmei HanDepartment of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA.
Stephen M Norris
Zhaohui Xu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThermotoga spp. are attractive candidates for producing biohydrogen, green chemicals, and thermostable enzymes. They may also serve as model systems for understanding life sustainability under hyperthermophilic conditions. A lack of genetic tools has hampered the investigation and application of these organisms. This study aims to develop a genetic transfer system for Thermotoga spp.

resultsMethods for preparing and handling Thermotoga solid cultures under aerobic conditions were optimized. A plating efficiency of ~50% was achieved when the bacterial cells were embedded in 0.3% Gelrite. A Thermotoga-E. coli shuttle vector pDH10 was constructed using pRQ7, a cryptic mini-plasmid found in T. sp. RQ7. Plasmid pDH10 was introduced to T. maritima and T. sp. RQ7 by electroporation and liposome-mediated transformation. Transformants were isolated, and the transformed kanamycin resistance gene (kan) was detected from the plasmid DNA extracts of the recombinant strains by PCR and was confirmed by restriction digestions. The transformed DNA was stably maintained in both Thermotoga and E. coli even without the selective pressure.

conclusionsThermotoga are transformable by multiple means. Recombinant Thermotoga strains have been isolated for the first time. A heterologous kan gene is functionally expressed and stably maintained in Thermotoga.

Indexed as

Genetic VectorsTransformation, BacterialAnti-Bacterial AgentsCloning, MolecularDNA, BacterialEscherichia coliGram-Negative Anaerobic Straight, Curved, and Helical RodsKanamycinPlasmidsThermotoga maritimaThermotoga neapolitanaAnti-Bacterial AgentsDNA, BacterialKanamycin

Identifiers

PMID22225774
PMCPMC3398313

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.