Evidence map›Paper›PMID 22223860›Full record

ArticleJournal of lipid research2012

Unusual binding of ursodeoxycholic acid to ileal bile acid binding protein: role in activation of FXRα.

Changming Fang, Fabian V Filipp, Jeffrey W Smith

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Bile acid transporter-mediated oral drug delivery.Journal of controlled release : official journal of the Controlled Release Society · 2020
    Review
  5. Review
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Changming FangCancer Research Center, Sanford-Burnham Medical Research Institute, La Jolla, CA 92037, USA.
Fabian V Filipp
Jeffrey W Smith
Sanford Burnham Prebys Medical Discovery Institute · US

Funding

Metalloproteinases in Tumor Progression and MetastasisR01CA108959 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI SMITH, JEFFREY W · 2005 to 2009
$2.5M
FXR signaling pathway is a valid target for chemoprevention in colorectal cancerR01CA135300 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI SMITH, JEFFREY W · 2009 to 2013
$2.5M
A Variant of Ileal Bile Acid Binding Protein in Colon CancerR21CA116329 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI SMITH, JEFFREY W · 2005 to 2006
$325k
Tumor pyruvate kinase as key regulator of cancer metabolismK99CA154887 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI FILIPP, FABIAN VOLKER · 2011 to 2012
$177k
NCI NIH HHS K99 CA154887NCI NIH HHS R01 CA-108959NCI NIH HHS R01 CA108959NCI NIH HHS R01 CA-135300NCI NIH HHS R01 CA135300NCI NIH HHS R21 CA-116329NCI NIH HHS R21 CA116329
6 · The paper itself

Abstract

Ursodeoxycholic acid (UDCA, ursodiol) is used to prevent damage to the liver in patients with primary biliary cirrhosis. The drug also prevents the progression of colorectal cancer and the recurrence of high-grade colonic dysplasia. However, the molecular mechanism by which UDCA elicits its beneficial effects is not entirely understood. The aim of this study was to determine whether ileal bile acid binding protein (IBABP) has a role in mediating the effects of UDCA. We find that UDCA binds to a single site on IBABP and increases the affinity for major human bile acids at a second binding site. As UDCA occupies one of the bile acid binding sites on IBABP, it reduces the cooperative binding that is often observed for the major human bile acids. Furthermore, IBABP is necessary for the full activation of farnesoid X receptor α (FXRα) by bile acids, including UDCA. These observations suggest that IBABP may have a role in mediating some of the intestinal effects of UDCA.

Indexed as

3-alpha-Hydroxysteroid Dehydrogenase (B-Specific)Binding SitesCaco-2 CellsChenodeoxycholic AcidEscherichia coliHumansHydroxysteroid DehydrogenasesIsopropyl ThiogalactosidePlasmidsPromoter Regions, GeneticProtein BindingProtein ConformationReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and NuclearRecombinant ProteinsRNA Interference3-alpha-Hydroxysteroid Dehydrogenase (B-Specific)AKR1C2 protein, humanChenodeoxycholic AcidHydroxysteroid DehydrogenasesIsopropyl ThiogalactosideReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and NuclearRecombinant ProteinsUrsodeoxycholic Acid

Identifiers

PMID22223860
PMCPMC3307643
OpenAlexW2127379506

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.