Evidence map›Paper›PMID 22221182›Full record

ArticleMolecular microbiology2012

Epigenetic regulation of the nitrosative stress response and intracellular macrophage survival by extraintestinal pathogenic Escherichia coli.

Stacey L Bateman, Patrick C Seed

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Stacey L BatemanDepartment of Molecular Genetics and Microbiology Center for Microbial Pathogenesis Department of Pediatrics, Duke University School of Medicine, Durham, NC 27710, USA.
Patrick C Seed
Microbial ID (United States) · US

Funding

pan-Genome of E.coli in the bladder and gut of women with recurrent UTIP50DK064540 · NIDDK · WASHINGTON UNIVERSITY · PI HULTGREN, SCOTT J. · 2002 to 2017
$17.9M
The Recombinase FimX: Role in type 1 pili regulation and E. coli-induced cystitisK08DK074443 · NIDDK · DUKE UNIVERSITY · PI SEED, PATRICK C. · 2006 to 2010
$398k
NIDDK NIH HHS DK07444301NIDDK NIH HHS K08 DK074443NIDDK NIH HHS L40 DK065547NIDDK NIH HHS P50 DK064540NIDDK NIH HHS P50 DK64540
6 · The paper itself

Abstract

Extraintestinal pathogenic Escherichia coli (ExPEC) reside in the enteric tract as a commensal reservoir, but can transition to a pathogenic state by invading normally sterile niches, establishing infection and disseminating to invasive sites like the bloodstream. Macrophages are required for ExPEC dissemination, suggesting the pathogen has developed mechanisms to persist within professional phagocytes. Here, we report that FimX, an ExPEC-associated DNA invertase that regulates the major virulence factor type 1 pili (T1P), is also an epigenetic regulator of a LuxR-like response regulator HyxR. FimX regulated hyxR expression through bidirectional phase inversion of its promoter region at sites different from the type 1 pili promoter and independent of integration host factor (IHF). In vitro, transition from high to low HyxR expression produced enhanced tolerance of reactive nitrogen intermediates (RNIs), primarily through de-repression of hmpA, encoding a nitric oxide-detoxifying flavohaemoglobin. However, in the macrophage, HyxR produced large effects on intracellular survival in the presence and absence of RNI and independent of Hmp. Collectively, we have shown that the ability of ExPEC to survive in macrophages is contingent upon the proper transition from high to low HyxR expression through epigenetic regulatory control by FimX.

Indexed as

Epigenesis, GeneticAnimalsCell LineDNA, BacterialEscherichia coliEscherichia coli ProteinsFimbriae ProteinsGene Expression Regulation, BacterialMacrophagesMicePromoter Regions, GeneticReactive Nitrogen SpeciesSequence DeletionSequence InversionVirulence FactorsDNA, BacterialEscherichia coli ProteinsFimbriae ProteinsReactive Nitrogen SpeciesVirulence Factors

Identifiers

PMID22221182
PMCPMC3809820
OpenAlexW1512903460

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.