Evidence map›Paper›PMID 22218223›Full record

ArticleGenes and immunity2012

CIITA promoter I CARD-deficient mice express functional MHC class II genes in myeloid and lymphoid compartments.

W M Zinzow-Kramer, A B Long, B A Youngblood, K M Rosenthal, R Butler, A-U-R Mohammed, I Skountzou, R Ahmed, B D Evavold, J M Boss

Open access · bronzeAbstract read
In one paragraph

Article in Genes and immunity, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. NLRC5, at the Heart of Antigen Presentation.Frontiers in immunology · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

W M Zinzow-KramerDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322, USA.
A B Long
B A Youngblood
K M Rosenthal
R Butler
A-U-R Mohammed
I Skountzou
R Ahmed
B D Evavold
J M Boss
Emory University · US

Funding

Targeting the PD-1 signaling pathway to rescue HIV T cell dysfunctionP01AI080192 · NIAID · EMORY UNIVERSITY · PI AHMED, RAFI · 2008 to 2012
$12.6M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008490 · NIGMS · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 1993 to 2022
$8.0M
Regulation of MHC Class II GenesR01GM047310 · NIGMS · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 1993 to 2015
$4.6M
MHC Class II Transactivator Function and RegulationR01AI034000 · NIAID · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 1993 to 2009
$2.6M
GENETICS &FUNCTIONS OF HSV1 GK IN VIRUS ENTRY &EGRESSR01AI043000 · NIAID · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI KOUSOULAS, KONSTANTIN G · 1999 to 2009
$2.4M
Regulation of the MHC Class II Transactivator CIITAR56AI034000 · NIAID · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 2010 to 2010
$383k
NIAID NIH HHS HHSN266200700006CNIAID NIH HHS P01 AI080192NIAID NIH HHS P01 AI080192-01NIAID NIH HHS R01 AI034000NIAID NIH HHS R01 AI043000NIAID NIH HHS R01AI43000NIAID NIH HHS R56 AI034000NIAID NIH HHS R56AI34000NIGMS NIH HHS R01 GM047310NIGMS NIH HHS T32 GM008490PHS HHS HHSN266 200700006CMD8
6 · The paper itself

Abstract

Three distinct promoters control the master regulator of major histocompatibility complex (MHC) class II expression, class II transactivator (CIITA), in a cell type-specific manner. Promoter I (pI) CIITA, expressed primarily by dendritic cells (DCs) and macrophages, expresses a unique isoform that contains a caspase-recruitment domain (CARD). The activity and function of this isoform are not understood, but are believed to enhance the function of CIITA in antigen-presenting cells. To determine whether isoform I of CIITA has specific functions, CIITA mutant mice were created in which isoform I was replaced with isoform III sequences. Mice in which pI and the CARD-encoding exon were deleted were also created. No defect in the formation of CD4 T cells, the ability to respond to a model antigen or bacterial or viral challenge was observed in mice lacking CIITA isoform I. Although CIITA and MHC-II expression was decreased in splenic DCs, pI knockout animals expressed CIITA from downstream promoters, suggesting that control of pI activity is mediated by unknown distal elements that could act at pIII, the B-cell promoter. Thus, no critical function is linked to the CARD domain of CIITA isoform I with respect to basic immune system development, function and challenge.

Indexed as

Genes, MHC Class IIPromoter Regions, GeneticAnimalsAntigen PresentationArenaviridae InfectionsCD4-Positive T-LymphocytesDendritic CellsEncephalomyelitis, Autoimmune, ExperimentalFemaleListeriosisLymphocytesMaleMiceMice, Inbred C57BLMice, KnockoutMyeloid CellsMHC class II transactivator proteinNuclear ProteinsProtein IsoformsTrans-Activators

Identifiers

PMID22218223
PMCPMC3366023
OpenAlexW2035651559

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.