Evidence map›Paper›PMID 22216168›Full record

ArticlePloS one2011

Common promoter elements in odorant and vomeronasal receptor genes.

Jussara S Michaloski, Pedro A F Galante, Maíra H Nagai, Lucia Armelin-Correa, Ming-Shan Chien, Hiroaki Matsunami, Bettina Malnic

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. International journal of genomics · 2022
    Article
  7. Article
  8. Article
  9. Review
  10. Unfolding SARS-CoV-2 viral genome to understand its gene expression regulation.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Chemosensory receptor specificity and regulation.Annual review of neuroscience · 2015
    Review
  17. Article
  18. Monoallelic expression of olfactory receptors.Annual review of cell and developmental biology · 2015
    Review
  19. Nuclear compartmentalization of odorant receptor genes.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Jussara S MichaloskiDepartamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, São Paulo, Brazil.
Pedro A F Galante
Maíra H Nagai
Lucia Armelin-Correa
Ming-Shan Chien
Hiroaki Matsunami
Bettina Malnic
Universidade de São Paulo · BRDuke University · US

Funding

Genetics Training Grant-Year 26T32GM007754 · NIGMS · DUKE UNIVERSITY · PI HAASE, STEVEN B · 1985 to 2019
$8.3M
Molecular Mechanisms Underlying Odorant RecognitionR01DC005782 · NIDCD · DUKE UNIVERSITY · PI MATSUNAMI, HIROAKI · 2002 to 2012
$3.5M
Ligand selectivity of vomeronasal receptorsR01DC010857 · NIDCD · DUKE UNIVERSITY · PI MATSUNAMI, HIROAKI · 2010 to 2014
$1.6M
NIDCD NIH HHS R01 DC005782NIDCD NIH HHS R01 DC010857NIGMS NIH HHS T32 GM007754
6 · The paper itself

Abstract

In mammals, odorants and pheromones are detected by hundreds of odorant receptors (ORs) and vomeronasal receptors (V1Rs and V2Rs) expressed by sensory neurons that are respectively located in the main olfactory epithelium and in the vomeronasal organ. Even though these two olfactory systems are functionally and anatomically separate, their sensory neurons show a common mechanism of receptor gene regulation: each neuron expresses a single receptor gene from a single allele. The mechanisms underlying OR and VR gene expression remain unclear. Here we investigated if OR and V1R genes share common sequences in their promoter regions.We conducted a comparative analysis of promoter regions of 39 mouse V1R genes and found motifs that are common to a large number of promoters. We then searched mouse OR promoter regions for motifs that resemble the ones found in the V1R promoters. We identified motifs that are present in both the V1R and OR promoter regions. Some of these motifs correspond to the known O/E like binding sites while others resemble binding sites for transcriptional repressors. We show that one of these motifs specifically interacts with proteins extracted from both nuclei from olfactory and vomeronasal neurons. Our study is the first to identify motifs that resemble binding sites for repressors in the promoters of OR and V1R genes. Analysis of these motifs and of the proteins that bind to these motifs should reveal important aspects of the mechanisms of OR/V1R gene regulation.

Indexed as

Promoter Regions, GeneticAmino Acid SequenceAnimalsDNA, ComplementaryGene ExpressionMiceMolecular Sequence DataNeuronsReceptors, OdorantSequence Homology, Amino AcidVomeronasal OrganDNA, ComplementaryReceptors, Odorant

Identifiers

PMID22216168
PMCPMC3247230
OpenAlexW2080034858

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.