Evidence map›Paper›PMID 22214925›Full record

ArticleProceedings of the ... International Conference on Information Technology: New Generations. International Conference on Information Technology: New Generations2011

Iterative Development of an Application to Support Nuclear Magnetic Resonance Data Analysis of Proteins.

Heidi J C Ellis, Ronald J Nowling, Jay Vyas, Timothy O Martyn, Michael R Gryk

Abstract read
In one paragraph

Article in Proceedings of the ... International Conference on Information Technology: New Generations. International Conference on Information Technology: New Generations, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Semantic Mediation to Improve Reproducibility for Biomolecular NMR Analysis.Transforming digital worlds : 13th International Conference, iConference 2018, Sheffield, UK, March 25-28, 2018, Proceedings. International Conference on Transforming Digital Worlds (13th : 2018 : Sheffield, England) · 2018
    Article
  2. Article
  3. Parser Combinators: a Practical Application for Generating Parsers for NMR Data.Proceedings of the ... International Conference on Information Technology: New Generations. International Conference on Information Technology: New Generations · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Heidi J C EllisWestern New England College, 1215 Wilbraham Road Springfield, MA 01119.
Ronald J Nowling
Jay Vyas
Timothy O Martyn
Michael R Gryk

Funding

CONNJUR: A Software Integration Platform for Biomolecular NMR SpectroscopyR01GM083072 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GRYK, MICHAEL R · 2009 to 2012
$1.2M
Database-driven software for biological NMR analysisR21EB001496 · NIBIB · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GRYK, MICHAEL R · 2005 to 2006
$327k
NIBIB NIH HHS R21 EB001496NIGMS NIH HHS R01 GM083072
6 · The paper itself

Abstract

The CONNecticut Joint University Research (CONNJUR) team is a group of biochemical and software engineering researchers at multiple institutions. The vision of the team is to develop a comprehensive application that integrates a variety of existing analysis tools with workflow and data management to support the process of protein structure determination using Nuclear Magnetic Resonance (NMR). The use of multiple disparate tools and lack of data management, currently the norm in NMR data processing, provides strong motivation for such an integrated environment. This manuscript briefly describes the domain of NMR as used for protein structure determination and explains the formation of the CONNJUR team and its operation in developing the CONNJUR application. The manuscript also describes the evolution of the CONNJUR application through four prototypes and describes the challenges faced while developing the CONNJUR application and how those challenges were met.

Identifiers

PMID22214925
PMCPMC3244275

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.