Evidence map›Paper›PMID 22212214›Full record

ArticleJournal of applied microbiology2012

Year round patchiness of Vibrio vulnificus within a temperate Texas bay.

S L M Franco, G J Swenson, R A Long

Abstract read
In one paragraph

Article in Journal of applied microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

S L M FrancoDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
G J Swenson
R A Long
University of South Carolina · USTexas A&M University · US

Funding

Pilot--Health Science ResearchP30ES009106 · NIEHS · TEXAS A&M UNIVERSITY SYSTEM · PI SAFE, STEPHEN H. · 1998 to 2006
$9.2M
NIEHS NIH HHS P30 ES009106PHS HHS 5P30E509106
6 · The paper itself

Abstract

aimsTo investigate with high geographical resolution the small-scale spatial and temporal distribution of the pathogen Vibrio vulnificus throughout the water column in a temperate Texas bay where numerous V. vulnificus infections had been reported by the regional media the previous summer. METHODS AND

resultsSurface and bottom water samples were collected from 19 sites between April 2005 and October 2006 from Matagorda Bay, TX. Physicochemical parameters were measured and V. vulnificus were analysed using quantitative polymerase chain reaction (Q-PCR) as a means of overcoming constraints of traditional culturing techniques. V. vulnificus was detected through out the year, although its temporal and spatial distribution was patchy. V. vulnificus abundances at individual sites ranged from <10 to >1·1×10(3)cellsml(-1) . No statistically reliable predictive model related to the physicochemical parameters could be developed for this pathogen.

conclusionsThis study demonstrates that year round detection of V. vulnificus while likely in the viable but nonculturable (VBNC) state during the winter months and emphasizes why physicochemical factors are insufficient metrics for robust regression modelling of this pathogen. SIGNIFICANCE AND IMPACT OF THE STUDY: This study provides an effective new tool, Q-PCR, to study environmental distribution of V. vulnificus and that in the light of the patchy distribution observed, new reliable approaches and a mechanistic understanding of pathogen ecology need to be considered to effectively model the aquatic distribution of V. vulnificus.

Indexed as

Water MicrobiologyBaysEnvironmental MonitoringGeographyHydrogen-Ion ConcentrationModels, BiologicalOxygenPolymerase Chain ReactionSalinitySeasonsSeawaterTemperatureTexasVibrio vulnificusOxygen

Identifiers

PMID22212214
PMCPMC3293253
OpenAlexW2097187202

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.