Evidence map›Paper›PMID 22210879›Full record

ArticleBlood2012

Gene expression profiles predictive of outcome and age in infant acute lymphoblastic leukemia: a Children's Oncology Group study.

Huining Kang, Carla S Wilson, Richard C Harvey, I-Ming Chen, Maurice H Murphy, Susan R Atlas, Edward J Bedrick, Meenakshi Devidas, Andrew J Carroll, Blaine W Robinson and 13 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Blood, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00002756 (Induction Intensification in Infant ALL), which is not on this map. Cited by 68 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 1 pooled it
9.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00002756 phase2completednot on this map

Induction Intensification in Infant ALL: A Children's Oncology Group Study

TypeinterventionalSponsorChildren's Oncology GroupRan1996 to 2012Enrolled221ConditionsLeukemiaArmsfilgrastim, asparaginase, cyclophosphamide, cytarabine, daunorubicin hydrochloride
3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 1 synthesis or guideline pooled it, 145 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. DistinctInternational journal of molecular sciences · 2024
    Article
  11. Article
  12. Prevalence ofFrontiers in pediatrics · 2024
    Article
  13. Haematologica · 2023
    Article
  14. Article
  15. Article
  16. Review
  17. Updates in infant acute lymphoblastic leukemia and the potential for targeted therapy.Hematology. American Society of Hematology. Education Program · 2022
    Article
  18. Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 10 institutions in 3 countries.

Huining KangUniversity of New Mexico Cancer Center and Department of Internal Medicine, University of New Mexico, Albuquerque, NM, USA.
Carla S Wilson
Richard C Harvey
I-Ming Chen
Maurice H Murphy
Susan R Atlas
Edward J Bedrick
Meenakshi Devidas
Andrew J Carroll
Blaine W Robinson
Ronald W Stam
Maria G Valsecchi
Rob Pieters
Nyla A Heerema
Joanne M Hilden
Carolyn A Felix
Gregory H Reaman
Bruce Camitta
Naomi Winick
William L Carroll
ZoAnn E Dreyer
Stephen P Hunger
Cheryl L Willman
Arcadia · USChildren's Oncology Group · USNew Mexico Cancer Center · USUNM Comprehensive Cancer CenterChildren's Hospital of Philadelphia · USErasmus MC - Sophia Children’s Hospital · NLUniversity of New Mexico · USChildren's Hospital Colorado · USChildren's National · USUniversity of Milano-Bicocca · IT

Funding

COG FOREIGN ACCRUALU10CA098543 · NCI · NATIONAL CHILDHOOD CANCER FOUNDATION · PI ADAMSON, PETER C. · 2003 to 2013
$335.5M
Children's Oncology Group Statistics &Data Center GrantU10CA098413 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI ANDERSON, JAMES R · 2003 to 2013
$67.5M
WOMEN'S CANCERS RESEARCH PROGRAMP30CA118100 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI Yolanda Sanchez · 2005 to 2026
$57.1M
UNM HSC Clinical and Translational Science CenterUL1TR001449 · NCATS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI CAMPEN, MATTHEW J, PANDHI, NANCY · 2015 to 2024
$36.9M
Support for Human Specimen Banking in NCI-Supported Cancer Clinical TrialsU24CA114766 · NCI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI RAMIREZ MILAN, NILSA DEL CARMEN · 2005 to 2014
$14.5M
UF Clinical and Translational Science AwardUL1TR000064 · NCATS · UNIVERSITY OF FLORIDA · PI NELSON, DAVID R · 2012 to 2014
$12.2M
University of New Mexico Clinical and Translational Science CenterUL1TR000041 · NCATS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI LARSON, RICHARD S · 2012 to 2014
$9.8M
Leukemia Signatures for Risk Classification &TargetingU01CA114762 · NCI · UNIVERSITY OF NEW MEXICO · PI WILLMAN, CHERYL LYNN · 2005 to 2009
$7.1M
MOLECULAR SIGNATURES FOR OUTCOME PREDICTION AND THERAPEUTIC TARGETING IN ALLU01CA157937 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI HUNGER, STEPHEN PATRICK, WILLMAN, CHERYL LYNN · 2011 to 2015
$2.9M
MOLECULAR GENETIC CHANGES IN LEUKEMIA IN INFANTSR01CA080175 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI FELIX, CAROLYN A · 1999 to 2006
$2.2M
NCATS NIH HHS UL1 TR000041NCATS NIH HHS UL1 TR000064NCATS NIH HHS UL1 TR001449NCI NIH HHS P30 CA118100NCI NIH HHS R01 CA080175NCI NIH HHS U01 CA114762NCI NIH HHS U01 CA157937NCI NIH HHS U10 CA098413NCI NIH HHS U10 CA098543NCI NIH HHS U10 CA98413NCI NIH HHS U24 CA114766
6 · The paper itself

Abstract

Gene expression profiling was performed on 97 cases of infant ALL from Children's Oncology Group Trial P9407. Statistical modeling of an outcome predictor revealed 3 genes highly predictive of event-free survival (EFS), beyond age and MLL status: FLT3, IRX2, and TACC2. Low FLT3 expression was found in a group of infants with excellent outcome (n = 11; 5-year EFS of 100%), whereas differential expression of IRX2 and TACC2 partitioned the remaining infants into 2 groups with significantly different survivals (5-year EFS of 16% vs 64%; P < .001). When infants with MLL-AFF1 were analyzed separately, a 7-gene classifier was developed that split them into 2 distinct groups with significantly different outcomes (5-year EFS of 20% vs 65%; P < .001). In this classifier, elevated expression of NEGR1 was associated with better EFS, whereas IRX2, EPS8, and TPD52 expression were correlated with worse outcome. This classifier also predicted EFS in an independent infant ALL cohort from the Interfant-99 trial. When evaluating expression profiles as a continuous variable relative to patient age, we further identified striking differences in profiles in infants less than or equal to 90 days of age and those more than 90 days of age. These age-related patterns suggest different mechanisms of leukemogenesis and may underlie the differential outcomes historically seen in these age groups.

Indexed as

Gene Expression ProfilingGene Expression Regulation, LeukemicAge FactorsAntineoplastic Combined Chemotherapy ProtocolsCarrier ProteinsCluster AnalysisCohort StudiesDNA-Binding ProteinsFemalefms-Like Tyrosine Kinase 3Gene Regulatory NetworksHomeodomain ProteinsHumansInfantKaplan-Meier EstimateMaleAFF1 protein, humanCarrier ProteinsDNA-Binding ProteinsFLT3 protein, humanfms-Like Tyrosine Kinase 3Homeodomain ProteinsIRX2 protein, humanMyeloid-Lymphoid Leukemia ProteinNuclear ProteinsOncogene Proteins, FusionTACC2 protein, humanTranscriptional Elongation FactorsTranscription FactorsTumor Suppressor Proteins

Identifiers

PMID22210879
PMCPMC3293641
OpenAlexW2135095550

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.