Evidence map›Paper›PMID 22209907›Full record

ArticleGenetics2012

Ecological genomics of Anopheles gambiae along a latitudinal cline: a population-resequencing approach.

Changde Cheng, Bradley J White, Colince Kamdem, Keithanne Mockaitis, Carlo Costantini, Matthew W Hahn, Nora J Besansky

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 101 papers.

0numbers the graph read from it
0cells of the map it votes in
101citing papers in PubMed
9.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

101 citing papers in PubMed, 204 citations in OpenAlex.

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  9. Evolutionary adaptation under climate change:Proceedings of the National Academy of Sciences of the United States of America · 2025
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  10. Fitness consequences of structural variation inferred from a House Finch pangenome.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  12. Evolutionary adaptation under climate change:bioRxiv : the preprint server for biology · 2024
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  17. Speciation within theResearch square · 2024
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41 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Changde ChengEck Institute for Global Health, Department of Biological Sciences, University of Notre Dame, Notre Dame, Indiana 46556, USA.
Bradley J White
Colince Kamdem
Keithanne Mockaitis
Carlo Costantini
Matthew W Hahn
Nora J Besansky
University of Notre Dame · USIndiana University Bloomington · USOrganisation de Coordination pour la lutte contre les Endémies en Afrique Centrale · CM

Funding

Functional Genomics of Inversion 2La in Anopheles gambiaeR01AI076584 · NIAID · UNIVERSITY OF NOTRE DAME · PI BESANSKY, NORA JESSIE · 2009 to 2013
$2.4M
NIAID NIH HHS R01 AI076584NIAID NIH HHS R01AI076584
6 · The paper itself

Abstract

The association between fitness-related phenotypic traits and an environmental gradient offers one of the best opportunities to study the interplay between natural selection and migration. In cases in which specific genetic variants also show such clinal patterns, it may be possible to uncover the mutations responsible for local adaptation. The malaria vector, Anopheles gambiae, is associated with a latitudinal cline in aridity in Cameroon; a large inversion on chromosome 2L of this mosquito shows large differences in frequency along this cline, with high frequencies of the inverted karyotype present in northern, more arid populations and an almost complete absence of the inverted arrangement in southern populations. Here we use a genome resequencing approach to investigate patterns of population divergence along the cline. By sequencing pools of individuals from both ends of the cline as well as in the center of the cline- where the inversion is present in intermediate frequency- we demonstrate almost complete panmixia across collinear parts of the genome and high levels of differentiation in inverted parts of the genome. Sequencing of separate pools of each inversion arrangement in the center of the cline reveals large amounts of gene flux (i.e., gene conversion and double crossovers) even within inverted regions, especially away from the inversion breakpoints. The interplay between natural selection, migration, and gene flux allows us to identify several candidate genes responsible for the match between inversion frequency and environmental variables. These results, coupled with similar conclusions from studies of clinal variation in Drosophila, point to a number of important biological functions associated with local environmental adaptation.

Indexed as

Genome, InsectAdaptation, BiologicalAnimalsAnophelesCameroonChromosome InversionChromosomes, InsectCluster AnalysisCrossing Over, GeneticEcologyFemaleGene-Environment InteractionGenetics, PopulationGenomicsGeographyKaryotype

Identifiers

PMID22209907
PMCPMC3316653
OpenAlexW2039155573

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.