ArticleGenetics2012
Extended linkage disequilibrium in noncoding regions in a conifer, Cryptomeria japonica.
Article in Genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed.
- 275 years of forestry meets genomics inEvolutionary applications · 2020Review
- Identification of novel putative causative genes and genetic marker for male sterility in Japanese cedar (Cryptomeria japonica D.Don).BMC genomics · 2018Article
- Potential of Genome-Wide Studies in Unrelated Plus Trees of a Coniferous Species,Frontiers in plant science · 2018Article
- Expected benefit of genomic selection over forward selection in conifer breeding and deployment.PloS one · 2018Article
- Linkage and Association Mapping for Two Major Traits Used in the Maritime Pine Breeding Program: Height Growth and Stem Straightness.PloS one · 2016Article
- Genetic differentiation and evolutionary adaptation in Cryptomeria japonica.G3 (Bethesda, Md.) · 2014Article
- Genome-wide distribution of genetic diversity and linkage disequilibrium in a mass-selected population of maritime pine.BMC genomics · 2014Article
- A Picea abies linkage map based on SNP markers identifies QTLs for four aspects of resistance to Heterobasidion parviporum infection.PloS one · 2014Article
- The evolutionary genetics of the genes underlying phenotypic associations for loblolly pine (Pinus taeda, Pinaceae).Genetics · 2013Article
- Distribution of long-range linkage disequilibrium and Tajima's D values in Scandinavian populations of Norway Spruce (Picea abies).G3 (Bethesda, Md.) · 2013Article
- Article
- Genome scanning for detecting adaptive genes along environmental gradients in the Japanese conifer, Cryptomeria japonica.Heredity · 2012Article
- Article
Corrections and comments
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Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We measured linkage disequilibrium in mostly noncoding regions of Cryptomeria japonica, a conifer belonging to Cupressaceae. Linkage disequilibrium was extensive and did not decay even at a distance of 100 kb. The average estimate of the population recombination rate per base pair was 1.55 × 10(-5) and was <1/70 of that in the coding regions. We discuss the impact of low recombination rates in a large part of the genome on association studies.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.