ArticleInternational journal for numerical methods in biomedical engineering2011
Partial differential equation transform - Variational formulation and Fourier analysis.
Article in International journal for numerical methods in biomedical engineering, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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13 citing papers in PubMed.
- Deep neural network analysis models for complex random telegraph signals.Scientific reports · 2023Article
- Geometric algebra generation of molecular surfaces.Journal of the Royal Society, Interface · 2022Article
- Hyperspectral chemical plume detection algorithms based on multidimensional iterative filtering decomposition.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2016Article
- Object-oriented Persistent Homology.Journal of computational physics · 2016Article
- Multidimensional persistence in biomolecular data.Journal of computational chemistry · 2015Article
- Segmentation of biomedical images using active contour model with robust image feature and shape prior.International journal for numerical methods in biomedical engineering · 2014Article
- Multiscale geometric modeling of macromolecules I: Cartesian representation.Journal of computational physics · 2014Article
- Active contour model coupling with higher order diffusion for medical image segmentation.International journal of biomedical imaging · 2014Article
- High-order fractional partial differential equation transform for molecular surface construction.Molecular based mathematical biology · 2013Article
- Geometric modeling of subcellular structures, organelles, and multiprotein complexes.International journal for numerical methods in biomedical engineering · 2012Article
- Biomolecular surface construction by PDE transform.International journal for numerical methods in biomedical engineering · 2012Article
- Mode decomposition evolution equations.Journal of scientific computing · 2012Article
- Selective Extraction of Entangled Textures via Adaptive PDE Transform.International journal of biomedical imaging · 2012Article
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3 authors.
Funding
Abstract
Nonlinear partial differential equation (PDE) models are established approaches for image/signal processing, data analysis and surface construction. Most previous geometric PDEs are utilized as low-pass filters which give rise to image trend information. In an earlier work, we introduced mode decomposition evolution equations (MoDEEs), which behave like high-pass filters and are able to systematically provide intrinsic mode functions (IMFs) of signals and images. Due to their tunable time-frequency localization and perfect reconstruction, the operation of MoDEEs is called a PDE transform. By appropriate selection of PDE transform parameters, we can tune IMFs into trends, edges, textures, noise etc., which can be further utilized in the secondary processing for various purposes. This work introduces the variational formulation, performs the Fourier analysis, and conducts biomedical and biological applications of the proposed PDE transform. The variational formulation offers an algorithm to incorporate two image functions and two sets of low-pass PDE operators in the total energy functional. Two low-pass PDE operators have different signs, leading to energy disparity, while a coupling term, acting as a relative fidelity of two image functions, is introduced to reduce the disparity of two energy components. We construct variational PDE transforms by using Euler-Lagrange equation and artificial time propagation. Fourier analysis of a simplified PDE transform is presented to shed light on the filter properties of high order PDE transforms. Such an analysis also offers insight on the parameter selection of the PDE transform. The proposed PDE transform algorithm is validated by numerous benchmark tests. In one selected challenging example, we illustrate the ability of PDE transform to separate two adjacent frequencies of sin(x) and sin(1.1x). Such an ability is due to PDE transform's controllable frequency localization obtained by adjusting the order of PDEs. The frequency selection is achieved either by diffusion coefficients or by propagation time. Finally, we explore a large number of practical applications to further demonstrate the utility of proposed PDE transform.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.