ArticleBMC biology2011
Difficult phylogenetic questions: more data, maybe; better methods, certainly.
Article in BMC biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
23 citing papers in PubMed.
- A Practical Guide to Design and Assess a Phylogenomic Study.Genome biology and evolution · 2022Article
- Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family.BMC biology · 2022Article
- Phylogenetic Signal, Congruence, and Uncertainty across Bacteria and Archaea.Molecular biology and evolution · 2021Article
- Resolving Recalcitrant Clades in the Pantropical Ochnaceae: Insights From Comparative Phylogenomics of Plastome and Nuclear Genomic Data Derived From Targeted Sequencing.Frontiers in plant science · 2021Article
- Evolution of P2A and P5A ATPases: ancient gene duplications and the red algal connection to green plants revisited.Physiologia plantarum · 2020Article
- The complete chloroplast genome ofEcology and evolution · 2020Article
- Reduced Genome of the Gut Symbiotic Bacterium "Frontiers in microbiology · 2020Article
- tRNA functional signatures classify plastids as late-branching cyanobacteria.BMC evolutionary biology · 2019Article
- Filtering nucleotide sites by phylogenetic signal to noise ratio increases confidence in the Neoaves phylogeny generated from ultraconserved elements.Molecular phylogenetics and evolution · 2018Article
- A Freeloader? The Highly Eroded Yet Large Genome of the Serratia symbiotica Symbiont of Cinara strobi.Genome biology and evolution · 2018Article
- Comparative genomics and the nature of placozoan species.PLoS biology · 2018Article
- Article
- Noise and biases in genomic data may underlie radically different hypotheses for the position of Iguania within Squamata.PloS one · 2018Article
- Reinventing the Wheel and Making It Round Again: Evolutionary Convergence in Buchnera-Serratia Symbiotic Consortia between the Distantly Related Lachninae Aphids Tuberolachnus salignus and Cinara cedri.Genome biology and evolution · 2016Article
- Plastid establishment did not require a chlamydial partner.Nature communications · 2015Article
- Molecular evolution of cytochrome bd oxidases across proteobacterial genomes.Genome biology and evolution · 2015Article
- Toward more accurate ancestral protein genotype-phenotype reconstructions with the use of species tree-aware gene trees.Molecular biology and evolution · 2015Article
- BIR Pipeline for Preparation of Phylogenomic Data.Evolutionary bioinformatics online · 2015Review
- Phylotranscriptomic analysis of the origin and early diversification of land plants.Proceedings of the National Academy of Sciences of the United States of America · 2014Article
- The stem cell system in demosponges: suggested involvement of two types of cells: archeocytes (active stem cells) and choanocytes (food-entrapping flagellated cells).Development genes and evolution · 2013Review
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Contradicting the prejudice that endosymbiosis is a rare phenomenon, Husník and co-workers show in BMC Biology that bacterial endosymbiosis has occured several times independently during insect evolution. Rigorous phylogenetic analyses, in particular using complex models of sequence evolution and an original site removal procedure, allow this conclusion to be established after eschewing inference artefacts that usually plague the positioning of highly divergent endosymbiont genomic sequences.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.