Evidence map›Paper›PMID 22203959›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Legume pectate lyase required for root infection by rhizobia.

Fang Xie, Jeremy D Murray, Jiyoung Kim, Anne B Heckmann, Anne Edwards, Giles E D Oldroyd, J Allan Downie

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed
16.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 261 citations in OpenAlex.

  1. Article
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  6. International journal of molecular sciences · 2026
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Nodule-specificaBIOTECH · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Signaling in Legume-Rhizobia Symbiosis.International journal of molecular sciences · 2023
    Review
  20. Article

56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Fang XieJohn Innes Centre, Norwich Research Park, Colney, Norwich NR4 7UH, United Kingdom.
Jeremy D Murray
Jiyoung Kim
Anne B Heckmann
Anne Edwards
Giles E D Oldroyd
J Allan Downie
John Innes Centre · GBInstitute of Plant Biology · HUNorwich Research Park · GB

Funding

Biotechnology and Biological Sciences Research Council BB/G023832/1Biotechnology and Biological Sciences Research Council E017045/1
6 · The paper itself

Abstract

To allow rhizobial infection of legume roots, plant cell walls must be locally degraded for plant-made infection threads (ITs) to be formed. Here we identify a Lotus japonicus nodulation pectate lyase gene (LjNPL), which is induced in roots and root hairs by rhizobial nodulation (Nod) factors via activation of the nodulation signaling pathway and the NIN transcription factor. Two Ljnpl mutants produced uninfected nodules and most infections arrested as infection foci in root hairs or roots. The few partially infected nodules that did form contained large abnormal infections. The purified LjNPL protein had pectate lyase activity, demonstrating that this activity is required for rhizobia to penetrate the cell wall and initiate formation of plant-made infection threads. Therefore, we conclude that legume-determined degradation of plant cell walls is required for root infection during initiation of the symbiotic interaction between rhizobia and legumes.

Indexed as

PhylogenyAmino Acid SequenceBase SequenceEnzyme InductionLikelihood FunctionsLotusMesorhizobiumModels, GeneticMolecular Sequence DataMutationPolysaccharide-LyasesReverse Transcriptase Polymerase Chain ReactionRoot Nodules, Plantpectate lyasePolysaccharide-Lyases

Identifiers

PMID22203959
PMCPMC3258600
OpenAlexW2128255331

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.