Evidence map›Paper›PMID 22203596›Full record

ArticleAntimicrobial agents and chemotherapy2012

Influence of soil use on prevalence of tetracycline, streptomycin, and erythromycin resistance and associated resistance genes.

Magdalena Popowska, Marzenna Rzeczycka, Antoni Miernik, Agata Krawczyk-Balska, Fiona Walsh, Brion Duffy

Abstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 150 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Antibiotics (Basel, Switzerland) · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Antibiotics (Basel, Switzerland) · 2022
    Review
  14. Review
  15. Article
  16. Review
  17. Review
  18. Urban areas, human health and technosols for the green deal.Environmental geochemistry and health · 2021
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Magdalena PopowskaDepartment of Applied Microbiology, Institute of Microbiology, University of Warsaw, Warsaw, Poland. magdapop@biol.uw.edu.pl
Marzenna Rzeczycka
Antoni Miernik
Agata Krawczyk-Balska
Fiona Walsh
Brion Duffy
University of Warsaw · PLAgroscope · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study examined differences in antibiotic-resistant soil bacteria and the presence and quantity of resistance genes in soils with a range of management histories. We analyzed four soils from agricultural systems that were amended with manure from animals treated with erythromycin and exposed to streptomycin and/or oxytetracycline, as well as non-manure-amended compost and forest soil. Low concentrations of certain antibiotic resistance genes were detected using multiplex quantitative real-time PCR (qPCR), with tet(B), aad(A), and str(A) each present in only one soil and tet(M) and tet(W) detected in all soils. The most frequently detected resistance genes were tet(B), tet(D), tet(O), tet(T), and tet(W) for tetracycline resistance, str(A), str(B), and aac for streptomycin resistance, and erm(C), erm(V), erm(X), msr(A), ole(B), and vga for erythromycin resistance. Transposon genes specific for Tn916, Tn1549, TnB1230, Tn4451, and Tn5397 were detected in soil bacterial isolates. The MIC ranges of isolated bacteria for tetracycline, streptomycin, and erythromycin were 8 to >256 μg/ml, 6 to >1,024 μg/ml, and 0.094 to >256 μg/ml, respectively. Based on 16S rRNA gene similarity, isolated bacteria showed high sequence identity to genera typical of soil communities. Bacteria with the highest MICs were detected in manure-amended soils or soils from agricultural systems with a history of antibiotic use. Non-manure-amended soils yielded larger proportions of antibiotic-resistant bacteria, but these had lower MICs, carried fewer antibiotic resistance genes, and did not display multidrug resistance (MDR).

Indexed as

Genes, BacterialSoil MicrobiologyAnimalsAnti-Bacterial AgentsDNA Transposable ElementsDrug Resistance, Multiple, BacterialErythromycinGram-Negative BacteriaGram-Positive BacteriaLivestockManureMicrobial Sensitivity TestsMultiplex Polymerase Chain ReactionRNA, Ribosomal, 16SStreptomycinTetracyclineAnti-Bacterial AgentsDNA Transposable ElementsErythromycinManureRNA, Ribosomal, 16SStreptomycinTetracycline

Identifiers

PMID22203596
PMCPMC3294877
OpenAlexW2069990905

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.