Evidence map›Paper›PMID 22197488›Full record

ArticleAmerican journal of human genetics2012

Exome sequence identifies RIPK4 as the Bartsocas-Papas syndrome locus.

Karen Mitchell, James O'Sullivan, Caterina Missero, Ed Blair, Rose Richardson, Beverley Anderson, Dario Antonini, Jeffrey C Murray, Alan L Shanske, Brian C Schutte and 6 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in American journal of human genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 91 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Functions of the RIP kinase family members in the skin.Cellular and molecular life sciences : CMLS · 2023
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Deciphering the Functional Role of RIPK4 in Melanoma.International journal of molecular sciences · 2021
    Article
  15. Review
  16. Review
  17. Review
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 9 institutions in 3 countries.

Karen MitchellFaculty of Medical and Human Sciences, Manchester Academic Health Sciences Centre, University of Manchester, UK.
James O'Sullivan
Caterina Missero
Ed Blair
Rose Richardson
Beverley Anderson
Dario Antonini
Jeffrey C Murray
Alan L Shanske
Brian C Schutte
Rose-Anne Romano
Satrajit Sinha
Sanjeev S Bhaskar
Graeme C M Black
Jill Dixon
Michael J Dixon
St Mary's Hospital · GBUniversity of Manchester · GBCeinge Biotecnologie Avanzate (Italy) · ITUniversity at Buffalo, State University of New York · USChildren's Hospital at Montefiore · USChurchill Hospital · GBManchester Academic Health Science Centre · GBMichigan State University · USUniversity of Iowa · US

Funding

Molecular Genetic Epidemiology of Cleft Lip and PalateR37DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 2004 to 2013
$6.8M
CLONING AND CHARACTERIZATION OF THE VAN DER WOUDE GENER01DE013513 · NIDCR · UNIVERSITY OF IOWA · PI SCHUTTE, BRIAN C · 2000 to 2009
$2.6M
MOLECULAR GENETIC EPIDEMIOLOGY OF CLEFT LIP AND PALATER01DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 1988 to 2003
$1.5M
Medical Research Council G0901539NIDCR NIH HHS DE08559NIDCR NIH HHS DE13513NIDCR NIH HHS R01 DE008559NIDCR NIH HHS R01 DE013513NIDCR NIH HHS R37 DE008559Telethon GGP09230
6 · The paper itself

Abstract

Pterygium syndromes are complex congenital disorders that encompass several distinct clinical conditions characterized by multiple skin webs affecting the flexural surfaces often accompanied by craniofacial anomalies. In severe forms, such as in the autosomal-recessive Bartsocas-Papas syndrome, early lethality is common, complicating the identification of causative mutations. Using exome sequencing in a consanguineous family, we identified the homozygous mutation c.1127C>A in exon 7 of RIPK4 that resulted in the introduction of the nonsense mutation p.Ser376X into the encoded ankyrin repeat-containing kinase, a protein that is essential for keratinocyte differentiation. Subsequently, we identified a second mutation in exon 2 of RIPK4 (c.242T>A) that resulted in the missense variant p.Ile81Asn in the kinase domain of the protein. We have further demonstrated that RIPK4 is a direct transcriptional target of the protein p63, a master regulator of stratified epithelial development, which acts as a nodal point in the cascade of molecular events that prevent pterygium syndromes.

Indexed as

ExomeAmino Acid SequenceAnimalsBase SequenceChildCleft LipCleft PalateConsanguinityCraniofacial AbnormalitiesExonsGenes, RecessiveGenetic LociHumansKeratinocytesMaleMicePhosphoproteinsProtein Serine-Threonine KinasesRIPK4 protein, humanRipk4 protein, mouseTP63 protein, humanTrans-ActivatorsTranscription FactorsTrp63 protein, mouseTumor Suppressor Proteins

Identifiers

PMID22197488
PMCPMC3257958
OpenAlexW2133034656

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.