ArticlePloS one2011
Transcriptome analysis of the oriental fruit fly (Bactrocera dorsalis).
Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.
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Who cites it
71 citing papers in PubMed.
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- Comparative Population Biology and Related Gene Expression in the Beta-Cypermethrin-Resistant Strains ofInsects · 2024Article
- Comparative transcriptomics of the irradiated melon fly (Frontiers in physiology · 2023Article
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- A De Novo Transcriptomics Approach Reveals Genes Involved in Thrips Tabaci Resistance to Spinosad.Insects · 2021Article
- Comprehensive Transcriptome and Metabolic Profiling of Petal Color Development inFrontiers in plant science · 2021Article
- De novo transcriptome analysis and identification of reproduction control genes from the red palm weevil Rhynchophorus ferrugineus.PloS one · 2021Article
- Transcriptome analysis of Anastrepha fraterculus sp. 1 males, females, and embryos: insights into development, courtship, and reproduction.BMC genetics · 2020Article
- De Novo Assembly of the Asian Citrus PsyllidInternational journal of molecular sciences · 2020Article
- Transcriptome Analysis of the Oriental Fruit FlyInsects · 2020Article
- ABA and sucrose co-regulate strawberry fruit ripening and show inhibition of glycolysis.Molecular genetics and genomics : MGG · 2020Article
- Genome-wide gene expression profiling of the melon fly, Zeugodacus cucurbitae, during thirteen life stages.Scientific data · 2020Article
- Characterization ofInsects · 2019Article
- Transcriptome analysis of the almond moth, Cadra cautella, female abdominal tissues and identification of reproduction control genes.BMC genomics · 2019Article
- Microbial Communities in Different Developmental Stages of the Oriental Fruit Fly, Bactrocera dorsalis, Are Associated with Differentially Expressed Peptidoglycan Recognition Protein-Encoding Genes.Applied and environmental microbiology · 2019Article
- Genome-Wide Analysis of MicroRNAs in Relation to Pupariation in Oriental Fruit Fly.Frontiers in physiology · 2019Article
- Article
- Gene expression inPeerJ · 2019Article
- RNA-seq analysis of gene expression changes during pupariation in Bactrocera dorsalis (Hendel) (Diptera: Tephritidae).BMC genomics · 2018Article
11 more citing papers are in PubMed but not listed here.
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Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe oriental fruit fly, Bactrocera dorsalis (Hendel), is one of the most economically important pests in the world, causing serious damage to fruit production. However, lack of genetic information on this organism is an obstacle to understanding the mechanisms behind its development and its ability to resist insecticides. Analysis of the B. dorsalis transcriptome and its expression profile data is essential to extending the genetic information resources on this species, providing a shortcut that will support studies on B. dorsalis. METHODOLOGY/PRINCIPAL
findingsWe performed de novo assembly of a transcriptome using short read sequencing technology (Illumina). The results generated 484,628 contigs, 70,640 scaffolds, and 49,804 unigenes. Of those unigenes, 27,455 (55.13%) matched known proteins in the NCBI database, as determined by BLAST search. Clusters of orthologous groups (COG), gene orthology (GO), and the Kyoto Encyclopedia of Genes and Genomes (KEGG) annotations were performed to better understand the functions of these unigenes. Genes related to insecticide resistance were analyzed in additional detail. Digital gene expression (DGE) libraries showed differences in gene expression profiles at different developmental stages (eggs, third-instar larvae, pupae, and adults). To confirm the DGE results, the expression profiles of six randomly selected genes were analyzed. CONCLUSION/SIGNIFICANCE: This transcriptome greatly improves our genetic understanding of B. dorsalis and makes a huge number of gene sequences available for further study, including both genes of known importance and genes of unknown function. The DGE data provide comprehensive insight into gene expression profiles at different developmental stages. This facilitates the study of the role of each gene in the developmental process and in insecticide resistance.
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