Evidence map›Paper›PMID 22194846›Full record

ArticlePloS one2011

Missense mutation in the second RNA binding domain reveals a role for Prkra (PACT/RAX) during skull development.

Benjamin K Dickerman, Christine L White, Claire Chevalier, Valérie Nalesso, Cyril Charles, Sophie Fouchécourt, Florian Guillou, Laurent Viriot, Ganes C Sen, Yann Hérault

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. A frameshift mutation in the murinebioRxiv : the preprint server for biology · 2024
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  4. Review
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  8. Article
  9. Edgotype: a fundamental link between genotype and phenotype.Current opinion in genetics & development · 2013
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 2 countries.

Benjamin K DickermanDepartment of Molecular Genetics, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio, United States of America.
Christine L White
Claire Chevalier
Valérie Nalesso
Cyril Charles
Sophie Fouchécourt
Florian Guillou
Laurent Viriot
Ganes C Sen
Yann Hérault
Case Western Reserve University · USÉcole Normale Supérieure de Lyon · FRUniversité de Strasbourg · FRCentre National de la Recherche Scientifique · FRCleveland Clinic Lerner College of Medicine · USInstitut Clinique de la Souris · FRUniversité de Tours · FR

Funding

TELOMERASE INACTIVATION BY RNASE L SIGNALS CELL DEATHP01CA062220 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI LI, XIAOXIA, STARK, GEORGE ROBERT · 1994 to 2020
$35.6M
NCI NIH HHS 5P01CA062220NCI NIH HHS P01 CA062220
6 · The paper itself

Abstract

Random chemical mutagenesis of the mouse genome can causally connect genes to specific phenotypes. Using this approach, reduced pinna (rep) or microtia, a defect in ear development, was mapped to a small region of mouse chromosome 2. Sequencing of this region established co-segregation of the phenotype (rep) with a mutation in the Prkra gene, which encodes the protein PACT/RAX. Mice homozygous for the mutant Prkra allele had defects not only in ear development but also growth, craniofacial development and ovarian structure. The rep mutation was identified as a missense mutation (Serine 130 to Proline) that did not affect mRNA expression, however the steady state level of RAX protein was significantly lower in the brains of rep mice. The mutant protein, while normal in most biochemical functions, was unable to bind dsRNA. In addition, rep mice displayed altered morphology of the skull that was consistent with a targeted deletion of Prkra showing a contribution of the gene to craniofacial development. These observations identified a specific mutation that reduces steady-state levels of RAX protein and disrupts the dsRNA binding function of the protein, demonstrating the importance of the Prkra gene in various aspects of mouse development.

Indexed as

Amino Acid SequenceAnimalsBase SequenceBody WeightBrainDNA Mutational AnalysisEnzyme ActivationGenes, RecessiveMiceMice, Mutant StrainsMolecular Sequence DataMutation, MissenseProtein BindingProtein MultimerizationProtein Structure, TertiaryRNAPrkra protein, mouseRNARNA-Binding ProteinsRNA, Double-StrandedRNA, Messenger

Identifiers

PMID22194846
PMCPMC3237451
OpenAlexW2075617003

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.