Evidence map›Paper›PMID 22194838›Full record

ArticlePloS one2011

Genomic approach to study floral development genes in Rosa sp.

Annick Dubois, Arnaud Remay, Olivier Raymond, Sandrine Balzergue, Aurélie Chauvet, Marion Maene, Yann Pécrix, Shu-Hua Yang, Julien Jeauffre, Tatiana Thouroude and 9 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 49 citations in OpenAlex.

  1. Cellular Heterogeneity and Developmental Dynamics of Aril in Papaya.International journal of molecular sciences · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Genetic and Biochemical Aspects of Floral Scents in Roses.International journal of molecular sciences · 2022
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. MIKCHorticulture research · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 1 country.

Annick DuboisLaboratoire Reproduction et Développement des Plantes, Institut Nationale de la Recherche Agronomique, Centre National de la Recherche Scientifique, Ecole Normale Supérieure, Lyon, France.
Arnaud Remay
Olivier Raymond
Sandrine Balzergue
Aurélie Chauvet
Marion Maene
Yann Pécrix
Shu-Hua Yang
Julien Jeauffre
Tatiana Thouroude
Véronique Boltz
Marie-Laure Martin-Magniette
Stéphane Janczarski
Fabrice Legeai
Jean-Pierre Renou
Philippe Vergne
Manuel Le Bris
Fabrice Foucher
Mohammed Bendahmane
Laboratoire Reproduction et Développement des Plantes · FRCentre National de la Recherche Scientifique · FRInstitut Agro Rennes-Angers · FRAix-Marseille Université · FRCentre Hospitalier Universitaire de Rennes · FRInstitut de Génétique, Environnement et Protection des Plantes · FRUniversité d'Angers · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cultivated for centuries, the varieties of rose have been selected based on a number of flower traits. Understanding the genetic and molecular basis that contributes to these traits will impact on future improvements for this economically important ornamental plant. In this study, we used scanning electron microscopy and sections of meristems and flowers to establish a precise morphological calendar from early rose flower development stages to senescing flowers. Global gene expression was investigated from floral meristem initiation up to flower senescence in three rose genotypes exhibiting contrasted floral traits including continuous versus once flowering and simple versus double flower architecture, using a newly developed Affymetrix microarray (Rosa1_Affyarray) tool containing sequences representing 4765 unigenes expressed during flower development. Data analyses permitted the identification of genes associated with floral transition, floral organs initiation up to flower senescence. Quantitative real time PCR analyses validated the mRNA accumulation changes observed in microarray hybridizations for a selection of 24 genes expressed at either high or low levels. Our data describe the early flower development stages in Rosa sp, the production of a rose microarray and demonstrate its usefulness and reliability to study gene expression during extensive development phases, from the vegetative meristem to the senescent flower.

Indexed as

Databases, GeneticExpressed Sequence TagsFlowersGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, DevelopmentalGenes, PlantGenomicsMeristemMolecular Sequence AnnotationOligonucleotide Array Sequence AnalysisReal-Time Polymerase Chain ReactionRosaTranscriptome

Identifiers

PMID22194838
PMCPMC3237435
OpenAlexW2045394123

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.