Evidence map›Paper›PMID 22193889›Full record

ReviewCurrent HIV/AIDS reports2012

Human microbiome and HIV/AIDS.

Deepak Saxena, Yihong Li, Liying Yang, Zhiheng Pei, Michael Poles, William R Abrams, Daniel Malamud

Abstract readReview
In one paragraph

Review in Current HIV/AIDS reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 1 synthesis or guideline pooled it, 89 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Deepak SaxenaDepartment of Basic Science and Craniofacial Biology, New York University College of Dentistry, New York, NY, USA. ds100@nyu.edu
Yihong Li
Liying Yang
Zhiheng Pei
Michael Poles
William R Abrams
Daniel Malamud
New York University · USNYU Langone Health · US

Funding

The Proteomic and Functional Profile of HIV Positive SalivaU19DE018385 · NIDCR · NEW YORK UNIVERSITY · PI MALAMUD, DANIEL · 2007 to 2014
$6.6M
Foregut microbiome in development of esophageal adenocarcinomaUH3CA140233 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NELSON, KAREN E., PEI, ZHIHENG · 2010 to 2014
$6.1M
FISH "N" Chips: A Microfluidic Processor for Isolating and Analyzing MicrobesR01DE020891 · NIDCR · SANDIA CORP-SANDIA NATIONAL LABORATORIES · PI SINGH, ANUP K. · 2009 to 2012
$1.8M
Foregut microbiome in development of esophageal adenocarcinomaUH2CA140233 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NELSON, KAREN E., PEI, ZHIHENG · 2009 to 2009
$1.1M
Bacterial colonization, inflammation and its role in carcinogenesisR03DE019178 · NIDCR · NEW YORK UNIVERSITY · PI SAXENA, DEEPAK · 2010 to 2011
$243k
NCI NIH HHS UH2 CA140233NCI NIH HHS UH3 CA140233NCI NIH HHS UH3CA140233NIDCR NIH HHS R01 DE020891NIDCR NIH HHS R01-DE020891NIDCR NIH HHS R03 DE019178NIDCR NIH HHS R03-DE019178NIDCR NIH HHS U19 DE018385NIDCR NIH HHS U19-DE018385
6 · The paper itself

Abstract

Understanding of the human microbiome continues to grow rapidly; however, reports on changes in the microbiome after HIV infection are still limited. This review surveys the progress made in methodology associated with microbiome studies and highlights the remaining challenges to this field. Studies have shown that commensal oral, gut, vaginal, and penile bacteria are vital to the health of the human immune system. Our studies on crosstalk among oral and gastrointestinal soluble innate factors, HIV, and microbes indicated that the oral and gut microbiome was altered in the HIV-positive samples compared to the negative controls. The importance of understanding the bacterial component of HIV/AIDS, and likelihood of "crosstalk" between viral and bacterial pathogens, will help in understanding the role of the microbiome in HIV-infected individuals and facilitate identification of novel antiretroviral factors for use as novel diagnostics, microbicides, or therapeutics against HIV infection.

Indexed as

FemaleGram-Negative BacteriaGram-Positive BacteriaHIV InfectionsHumansIntestinesLungMaleMetagenomeMicrobial InteractionsMouthPenisVagina

Identifiers

PMID22193889
PMCPMC4154628
OpenAlexW2034354646

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.