Evidence map›Paper›PMID 22193368›Full record

ArticleThe Analyst2012

Selective enrichment and sensitive detection of peptide and protein biomarkers in human serum using polymeric reverse micelles and MALDI-MS.

Nadnudda Rodthongkum, Rajasekhar Ramireddy, S Thayumanavan, W Vachet Richard

Open access · greenAbstract read
In one paragraph

Article in The Analyst, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nadnudda RodthongkumDepartment of Chemistry, University of Massachusetts, LGRT 104 710 N. Pleasant St, Amherst, Massachusetts MA 01003, USA.
Rajasekhar Ramireddy
S Thayumanavan
W Vachet Richard
University of Massachusetts Amherst · US

Funding

New Amphiphillic Dendrimers for Encapsulation and ReleaseR01GM065255 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI THAYUMANAVAN, SANKARAN · 2003 to 2019
$4.3M
NIGMS NIH HHS GM-065255NIGMS NIH HHS R01 GM065255
6 · The paper itself

Abstract

Reverse-micelle forming amphiphilic homopolymers with carboxylic acid and quaternary amine substituents are used to selectively enrich biomarker peptides and protein fragments from human serum prior to matrix assisted laser desorption/ionization mass spectrometry (MALDI-MS) analysis. After depletion of human serum albumin (HSA) and immunoglobulin G (IgG), low abundance peptide biomarkers can be selectively enriched and detected by MALDI-MS at clinically relevant concentrations by using the appropriate homopolymer(s) and extraction pH value(s). Three breast cancer peptide biomarkers, bradykinin, C4a, and ITIH(4), were chosen to test this new approach, and detection limits of 0.5 ng mL(-1), 0.08 ng mL(-1), and 0.2 ng mL(-1), respectively, were obtained. In addition, the amphiphilic homopolymers were used to detect prostate specific antigen (PSA) at concentrations as low as 0.5 ng mL(-1) by targeting a surrogate peptide fragment of this protein biomarker. Selective enrichment and sensitive MS detection of low abundance peptide/protein biomarkers by these polymeric reverse micelles should be a sensitive and straightforward approach for biomarker screening in human serum.

Indexed as

BiomarkersBlood ProteinsBradykininCarboxylic AcidsComplement C4aFemaleGlycoproteinsHumansMaleMicellesPeptide FragmentsProstate-Specific AntigenProteinase Inhibitory Proteins, SecretoryQuaternary Ammonium CompoundsSensitivity and SpecificitySpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationBiomarkersBlood ProteinsBradykininCarboxylic AcidsComplement C4aGlycoproteinsITIH4 protein, humanMicellesPeptide FragmentsProstate-Specific AntigenProteinase Inhibitory Proteins, SecretoryQuaternary Ammonium CompoundsSurface-Active Agents

Identifiers

PMID22193368
PMCPMC3771100
OpenAlexW2091102516

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.