ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2012
Diversity array technology markers: genetic diversity analyses and linkage map construction in rapeseed (Brassica napus L.).
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed.
- Adaptation Strategies to Improve the Resistance of Oilseed Crops to Heat Stress Under a Changing Climate: An Overview.Frontiers in plant science · 2021Review
- Dissecting the Genetic Basis of Lateral and Central Spikelet Development and Grain Traits inPlants (Basel, Switzerland) · 2020Article
- Article
- Genetic Diversity, Population Structure and Marker-Trait Association for 100-Seed Weight in International Safflower Panel Using SilicoDArT Marker Information.Plants (Basel, Switzerland) · 2020Article
- Genotyping by sequencing provides new insights into the diversity of Napier grass (Cenchrus purpureus) and reveals variation in genome-wide LD patterns between collections.Scientific reports · 2019Article
- Characterizing Palestinian snake melon (Cucumis melo var. flexuosus) germplasm diversity and structure using SNP and DArTseq markers.BMC plant biology · 2018Article
- Article
- Genome-wide association analysis of agronomic traits in wheat under drought-stressed and non-stressed conditions.PloS one · 2017Article
- Multi-environment QTL studies suggest a role for cysteine-rich protein kinase genes in quantitative resistance to blackleg disease in Brassica napus.BMC plant biology · 2016Article
- Genome-wide Association Study Identifies New Loci for Resistance toFrontiers in plant science · 2016Article
- Genome-wide identification of SSR and SNP markers from the non-heading Chinese cabbage for comparative genomic analyses.BMC genomics · 2015Article
- Constructing a dense genetic linkage map and mapping QTL for the traits of flower development in Brassica carinata.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Article
- Comparative genomics of Brassicaceae crops.Breeding science · 2014Review
- New evidence of ancestral polyploidy in the Genistoid legume Lupinus angustifolius L. (narrow-leafed lupin).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Article
- Quantitative trait loci for thermal time to flowering and photoperiod responsiveness discovered in summer annual-type Brassica napus L.PloS one · 2014Article
- Genome-wide delineation of natural variation for pod shatter resistance in Brassica napus.PloS one · 2014Article
- Construction of integrated linkage map of a recombinant inbred line population of white lupin (Lupinus albus L.).Breeding science · 2013Article
- A consensus map of rapeseed (Brassica napus L.) based on diversity array technology markers: applications in genetic dissection of qualitative and quantitative traits.BMC genomics · 2013Article
- Genetic and physical mapping of flowering time loci in canola (Brassica napus L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013Article
- Article
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Authors and funding
10 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We developed Diversity Array Technology (DArT) markers for application in genetic studies of Brassica napus and other Brassica species with A or C genomes. Genomic representation from 107 diverse genotypes of B. napus L. var. oleifera (rapeseed, AACC genomes) and B. rapa (AA genome) was used to develop a DArT array comprising 11 520 clones generated using PstI/BanII and PstI/BstN1 complexity reduction methods. In total, 1547 polymorphic DArT markers of high technical quality were identified and used to assess molecular diversity among 89 accessions of B. napus, B. rapa, B. juncea, and B. carinata collected from different parts of the world. Hierarchical cluster and principal component analyses based on genetic distance matrices identified distinct populations clustering mainly according to their origin/pedigrees. DArT markers were also mapped in a new doubled haploid population comprising 131 lines from a cross between spring rapeseed lines 'Lynx-037DH' and 'Monty-028DH'. Linkage groups were assigned on the basis of previously mapped simple sequence repeat (SSRs), intron polymorphism (IP), and gene-based markers. The map consisted of 437 DArT, 135 SSR, 6 IP, and 6 gene-based markers and spanned 2288 cM. Our results demonstrate that DArT markers are suitable for genetic diversity analysis and linkage map construction in rapeseed.
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