Evidence map›Paper›PMID 22192890›Full record

ArticleBMC microbiology2011

Reliable identification at the species level of Brucella isolates with MALDI-TOF-MS.

Florigio Lista, Frans A G Reubsaet, Riccardo De Santis, Rene R Parchen, Ad L de Jong, Jasper Kieboom, Anton L van der Laaken, Ingrid A I Voskamp-Visser, Silvia Fillo, Hugo-Jan Jansen and 2 more

Abstract read
In one paragraph

Article in BMC microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Canine Brucellosis: An Update.Frontiers in veterinary science · 2021
    Review
  7. Article
  8. Proteomics ofMicroorganisms · 2020
    Article
  9. Brucellosis - laboratory workers' nightmare come true: A case study.African journal of laboratory medicine · 2020
    Article
  10. Laboratory Diagnosis of Human Brucellosis.Clinical microbiology reviews · 2019
    Review
  11. Article
  12. Comparison of standard and on-plate extraction protocols for identification of mastitis-causing bacteria by MALDI-TOF MS.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2019
    Article
  13. Answer to March 2019 Photo Quiz.Journal of clinical microbiology · 2019
    Article
  14. Article
  15. Article
  16. Misidentification of Risk Group 3/Security Sensitive Biological Agents by MALDI-TOF MS in Canada: November 2015-October 2017.Canada communicable disease report = Releve des maladies transmissibles au Canada · 2018
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Florigio ListaHistology and Molecular Biology Section, Army Medical and Veterinary Research Center, Via Santo Stefano Rotondo 4, 00184 Rome, Italy.
Frans A G Reubsaet
Riccardo De Santis
Rene R Parchen
Ad L de Jong
Jasper Kieboom
Anton L van der Laaken
Ingrid A I Voskamp-Visser
Silvia Fillo
Hugo-Jan Jansen
Jan Van der Plas
Armand Paauw

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe genus Brucella contains highly infectious species that are classified as biological threat agents. The timely detection and identification of the microorganism involved is essential for an effective response not only to biological warfare attacks but also to natural outbreaks. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) is a rapid method for the analysis of biological samples. The advantages of this method, compared to conventional techniques, are rapidity, cost-effectiveness, accuracy and suitability for the high-throughput identification of bacteria. Discrepancies between taxonomy and genetic relatedness on the species and biovar level complicate the development of detection and identification assays.

resultsIn this study, the accurate identification of Brucella species using MALDI-TOF-MS was achieved by constructing a Brucella reference library based on multilocus variable-number tandem repeat analysis (MLVA) data. By comparing MS-spectra from Brucella species against a custom-made MALDI-TOF-MS reference library, MALDI-TOF-MS could be used as a rapid identification method for Brucella species. In this way, 99.3% of the 152 isolates tested were identified at the species level, and B. suis biovar 1 and 2 were identified at the level of their biovar. This result demonstrates that for Brucella, even minimal genomic differences between these serovars translate to specific proteomic differences.

conclusionsMALDI-TOF-MS can be developed into a fast and reliable identification method for genetically highly related species when potential taxonomic and genetic inconsistencies are taken into consideration during the generation of the reference library.

Indexed as

Bacterial Typing TechniquesBrucellaCluster AnalysisDNA, BacterialGenome, BacterialMinisatellite RepeatsProteomeSpecies SpecificitySpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationDNA, BacterialProteome

Identifiers

PMID22192890
PMCPMC3314589

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.